Castellaniella defragrans: BN940_12831
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Entry
BN940_12831 CDS
T03058
Name
(GenBank) Transcription accessory protein
KO
K06959
protein Tex
Organism
cdn
Castellaniella defragrans
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
BN940_12831
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
HHH_3
Tex_N
S1
HHH_9
S1_RRP5
YqgF
HHH_7
T2SSK
Spt6_S1
RNase_II_C_S1
HHH_6
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
CDM25016
UniProt:
W8X5A5
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Position
2765834..2768209
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AA seq
791 aa
AA seq
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MTQTSPDSQTHAVDPARILRLLTAELDARPAQVAAAVDLLDSGATVPFIARYRKEATGGL
DDTVLRQLEVRLLYIRELEGRRVAILDSIAGQGKLDDALRTQILEADSKQRLEDLYAPYK
PKRRTRAQIAREAGLEPLADALLADPAAEPEVLAAGYLNPEAGFEDARAALNGARDILAE
RFAENATLLDTLRTELWNTGRITAQVVAGKETEGANFRDWFDFSESLRTLPSHRILALLR
GRQQGILDLRLGLDPEREAETPHPFVARVADILDLDARFDARATPRQHWLAEVCRWTWRV
KLLTGFETELIGRLRETAEAEAIRVFAANLKDLLLAAPAGPKAVLGLDPGIRTGVKAAAI
DATGKLLETATIYPFEPRRDVEGSLRTLAALVARHRIGLVAIGNGTASRETERLVATLRE
RHPELAFERVVVSEAGASVYSASELAAQEFPELDVSLRGAVSIARRLQDPLAELVKIEPK
AIGVGQYQHDVNQRELARSLDAVVEDCVNAVGVDVNTASAPLLTRVSGLNQSLARNIVQW
REAHGAFRNRQALRDVPRFGDKAFEQAAGFLRIPGSDNPLDASAVHPEAYPVVERILHKI
GRPATAVMGHADSLKGLSPADFTDERFGLPTVRDIFAELEKPGRDPRPEFKTATFKEGIH
DIKDLAPGMVLEGVVSNVANFGAFVDIGVHQDGLVHVSALADRFVKDPRDVVRVGQTVQV
RVLEVDVARKRIALSMRKDDPEPRAAGGAAGAAAGNGRPGGRGGPRGGRPDRPAAAPQGA
MAEAFARLKKG
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgactcagaccagccccgactcccagacccatgccgtcgatcccgcccgcatcctgcgg
ctgctgacggcggaactcgacgcgcggcccgcccaggtcgcggccgccgtggacctgctg
gactccggcgccacggtgcccttcatcgcccgctaccgcaaggaagccaccggcgggctg
gacgacacggtgctgcgccagctggaagtgcgcctgctctacatccgcgagctggaaggc
cgccgtgtggcgatcctggactccatcgccggacagggcaagctggatgacgccctgcgc
acgcagatcctggaggccgacagcaagcagcggctggaggacctgtacgccccctacaag
ccgaagcggcgcacgcgcgcccagatcgcccgcgaggcgggcctggagcccctggccgac
gccctgctggccgatcccgcggccgaacccgaggtcctggcggccggctacctgaacccc
gaggccggcttcgaggacgcgcgcgcggccctgaacggcgcgcgcgacatcctggccgag
cgcttcgcggaaaacgccacgctgctcgacacgctgcgcacggagctctggaacaccggc
cggatcaccgcccaggtcgtggcgggcaaggagaccgagggcgcgaacttccgcgactgg
ttcgacttcagcgaaagcctgcgcaccctgccctcgcaccgcatcctggcgttgctgcgc
ggccgccagcagggcatcctggacctgcgcctggggctggaccccgaacgcgaggccgaa
accccgcaccccttcgtggcgcgcgtggccgacatcctggacctggacgcgcgcttcgac
gcccgcgccaccccgcgccagcactggctggccgaagtctgccgctggacctggcgggtc
aagctgctgaccggcttcgagaccgagctgatcggccggctgcgcgaaacggccgaggcc
gaggcgatccgcgtgttcgccgccaacctgaaggacctgctgctggcagcgcccgccggc
ccgaaggccgtgctgggcctggaccccggcatccgcacgggcgtcaaggccgccgccatc
gacgccaccggcaagctgctggagaccgccacgatctaccccttcgagccgcgccgcgac
gtcgagggcagcctgcgcaccctggccgcgctggtcgcgcgccaccgcatcgggctggtg
gccatcggcaacggcaccgcctcgcgcgagaccgagcgcctggtcgccacgctgcgcgag
cgccaccccgaactggccttcgagcgcgtggtcgtgtccgaggccggcgcctcggtctat
tcggcctccgagctggcggcccaggaattccccgagctggacgtcagcctgcgcggcgcg
gtctccatcgcccgccgcctgcaggatccgctggccgaactggtgaagatcgagcccaag
gccatcggcgtgggccagtaccagcacgacgtcaaccagcgcgagctggcgcgctccctg
gacgcggtggtcgaggactgcgtgaacgccgtcggcgtggacgtgaacacggcctcggcg
ccgctgctgacgcgcgtgtccgggctgaaccagtccctggcgcgcaacatcgtccagtgg
cgcgaggcgcacggcgccttccgcaaccgccaggcgctgcgcgacgtgccccgcttcggc
gacaaggccttcgagcaggcggccggcttcctgcgcatcccgggctccgacaatccgctg
gacgcctcggccgtgcacccggaagcctaccccgtggtcgagcgcatcctgcacaagatc
ggccggcccgccacggcggtgatgggccatgccgattccctgaaaggcctgtccccggcg
gacttcaccgacgagcgcttcggcctgcccacggtgcgcgacatcttcgcggaactggaa
aaaccaggccgcgacccgcgccccgagttcaagacggcgacattcaaggaaggcatccac
gacatcaaggacctggcgcccggcatggtcctcgaaggcgtggtcagcaacgtcgccaat
ttcggcgccttcgtggacatcggcgtgcaccaggacggcctggtgcacgtgtccgccctg
gccgacaggttcgtcaaggacccgcgcgacgtggtgcgcgtgggccagacggtgcaggtg
cgcgtgctggaggtggacgtggcgcgcaagcgcatcgccctgagcatgcgcaaggacgat
ccggagccgcgcgccgcgggcggcgcggccggcgccgccgccggcaacggccggccgggc
gggcgcggcggcccgcgcggcggacggcccgaccggcccgccgccgcgccccagggcgcc
atggccgaagccttcgcgcggctgaaaaagggctga
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