Castellaniella defragrans: BN940_14526
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Entry
BN940_14526 CDS
T03058
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
cdn
Castellaniella defragrans
Pathway
cdn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN940_14526
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdn02000
]
BN940_14526
Transporters [BR:
cdn02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BN940_14526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
SBP_bac_1
PBP_like_2
Methyltransf_3
Motif
Other DBs
NCBI-ProteinID:
CDM25350
UniProt:
W8X9S8
LinkDB
All DBs
Position
complement(3141638..3142666)
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AA seq
342 aa
AA seq
DB search
MKNLLKLASVFSLAVAPMLSQAVTLNVGSYGGSTEQAFRDSIIPMFKKKTGVDITYVPGN
STDTLAKLVAQKKHPQFDVVLIDDGPMEQAQQFNLCAALAPAPVYQDLYPLSNMGKTAVA
LGVVATGLFYNKEAFAKAGWAAPDSWLDLEDPKFRQKVVIPPISNGYGLHTLIKFAELNG
GGVKDIEPGFKAIIDKVAPNVLAWEPSPGKMSELFQNGSGVLGVWGSGRVEALKNTGFPV
EFVYPKEGAVALFTAVCPVARPDAKPEAQQFVQFLLSPEIQAILAKTQAWGPVNSKTRLT
PEVAAAVPYGPEQIGKLEAVDYSVVNVERGKWTNRWNRTVER
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacttgttgaaactggcgtcggtcttttccctggccgtcgcgccgatgctgtcg
caggcggtcacgctgaacgtgggttcgtacggcggttcgacggagcaggccttccgcgac
agcatcatccccatgttcaagaaaaagaccggcgtggacattacctatgtgccggggaat
tccacggatacgctggccaagctggtggcgcagaaaaagcacccgcagttcgacgtggtg
ctgatcgacgatggccccatggagcaggcccagcaattcaatctgtgcgccgccctggcg
ccggcgcccgtctatcaggacctgtatcccttgtcgaacatgggcaagaccgcggtcgcg
ctgggcgtggtggcgacgggcctcttctacaacaaggaagccttcgcaaaggccggctgg
gccgcgcccgactcctggctggatctcgaggatcccaagttccgccagaaggtcgtgatc
ccgccgatctcgaacggctacggcctgcatacgctgatcaagttcgccgagctgaacgga
gggggcgtcaaggacatcgaacccgggttcaaggccatcatcgacaaggtggcgcccaat
gtcctggcctgggagccgtcccccggcaagatgtccgaattgttccagaatggttcgggg
gtcctgggcgtatggggcagcggccgggtggaagcgctgaaaaacacgggcttcccggtg
gagttcgtctatcccaaagaaggcgcggtcgccttgttcacggcggtctgcccggtggcg
cgcccggatgccaagcccgaggcgcagcagttcgtgcagtttctcctcagccccgagatc
caggccattctcgccaagacccaggcctgggggccggtcaacagcaagacccggttgacg
ccggaagtggccgccgccgtgccgtatggcccggagcagatcggcaagctcgaggcggtg
gactattccgtggtgaacgtggaacgcggcaagtggaccaaccgctggaaccgtacggtc
gagcgctag
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integrated database retrieval system
