Castellaniella defragrans: BN940_15876
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Entry
BN940_15876 CDS
T03058
Name
(GenBank) TRAP transporter solute receptor
KO
K11688
TRAP-type transport system periplasmic protein
Organism
cdn
Castellaniella defragrans
Pathway
cdn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BN940_15876
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdn02000
]
BN940_15876
Transporters [BR:
cdn02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
BN940_15876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
GDPD
DUF3106
Motif
Other DBs
NCBI-ProteinID:
CDM25616
UniProt:
W8X5Z7
LinkDB
All DBs
Position
complement(3450183..3451169)
Genome browser
AA seq
328 aa
AA seq
DB search
MQFRTLLLASVCLLAASVAQAKTLKLSHQWPQGDGRDAGARLFIQEVQKQDPSLKFRVYP
GASLISNPLKQIDALADGSIDLSIFPLIYAVGKAPEFSITILPGAISGVQDAMRFKGTDY
EKRLQDVARKQGFHILSWWWTEGGIADTVRPITTPDSVKGLKFRGADRTIDTMLKTAGAS
VFSMPSTELYNAMQTGVLDGLMTSYETFMSMRLYEQTRYATLGGDYTIFVVFQPLVISTK
AWDGLSDEQKRVFEKAAEATLPSFNKEQDRIKHDTVKKFESAGVQVHAMTQDEYRSWLEL
AHRTAWPEYAAISPEAKGLLESVEALSK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcaggaccctattgctggcttcggtgtgcctgttggccgcttcggtggcccag
gccaagaccctgaagctgtcccatcagtggccgcagggcgacgggagggatgccggagcc
cggctgttcatccaggaagtgcagaagcaggatccttccctgaagttccgggtctatccc
ggcgcatcgctgatcagcaacccgctcaagcagatcgacgcgctggccgacgggtcgatc
gacctttccatctttcccctgatctacgcggtggggaaggcgccggaattttccatcacc
atcctgcccggcgcgatcagcggcgtgcaggacgccatgcgcttcaagggcacggactat
gaaaagcgcctgcaggacgtggcccgcaagcaggggtttcacatcctgagctggtggtgg
accgaaggcggcatcgccgatacggtccgccccatcacgacgcccgacagtgtcaagggg
ctgaagttccggggcgccgaccgcacgatcgatacgatgctgaagacggccggggcttcg
gtcttttccatgccgtcgaccgagctgtacaacgccatgcagaccggtgtgctcgatggc
ctgatgacgtcctatgaaaccttcatgagcatgcgcctgtacgagcagaccaggtatgcc
accctgggcggggactacaccattttcgtcgtgttccagcccctggtgatttcgaccaag
gcctgggacggcctgagcgacgagcagaagcgtgtcttcgagaaggctgccgaagccacg
ttgccgtccttcaacaaggaacaggaccgtatcaagcacgacaccgtgaagaagttcgag
tccgcgggagtgcaggtccatgccatgacgcaggacgagtacaggagctggctggaactg
gcgcacaggacggcatggccggagtatgcggcgatcagccccgaggccaaggggctgctg
gagtcggtcgaagccctgtcgaagtga
DBGET
integrated database retrieval system
