Castellaniella defragrans: BN940_16126
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Entry
BN940_16126 CDS
T03058
Name
(GenBank) probable LysR-family transcriptional regulator
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
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Castellaniella defragrans
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cdn03000
]
BN940_16126
03036 Chromosome and associated proteins [BR:
cdn03036
]
BN940_16126
Transcription factors [BR:
cdn03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BN940_16126
Chromosome and associated proteins [BR:
cdn03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
BN940_16126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_AsnC-type
P22_Cro
HTH_24
Motif
Other DBs
NCBI-ProteinID:
CDM25665
UniProt:
W8X9Z1
LinkDB
All DBs
Position
3503059..3504006
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AA seq
315 aa
AA seq
DB search
MQLDHDNLRALAAVVREGSFERAAAALHVTPSAVSQRIKTLESRMGRLLVLRTIPAQPTD
DGRVLVRLAEQAALLEHEALERLGMGEDRPAPSLRIAVNHDSLETWFIEAATRYAEQTRT
TLDLISEDQDHTAALLRNGSVLAAVTTLGDPVQGCRVHALGRMRYVATCAPAFHARHFAR
GVTPDALASAPVLVFNRKDALQAQFARQVMGDTPWQPPTWWVPSSHAFVSATLAGLGWTM
NPLPMVREALEDGRLMPLRARAWHDVPLYWQHWRTGAHTMELLTSAVLRAARALVRPARA
PVSSPGAGGSGSSSA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaactggatcacgacaacctgcgcgccctggcggccgtggtgcgcgaaggcagcttc
gagcgggccgccgcggccctgcacgtcaccccctcggccgtgtcccagcgcatcaagacg
ctggaatcgcgcatggggcggctgctggtgctgcgcaccatcccggcgcagcccacggac
gacggccgcgtcctggtgcggctggccgagcaggccgccctgctggagcacgaggcgctg
gagcgcctgggcatgggcgaggaccgccccgcgcccagcctgcgcatcgcggtcaaccac
gacagcctggagacctggttcatcgaggcggccacgcgctacgcggaacagacccgcacc
acgctggacctgatctccgaggaccaggaccacacggccgccctgctgcgcaacggcagc
gtgctggcggccgtcaccacgctgggcgatccggtgcagggctgccgggtccacgcgctg
gggcgcatgcgctacgtcgccacctgcgcgcccgccttccacgcccggcatttcgcccgc
ggcgtgaccccggacgcgctggcgagcgcgccggtgctggtcttcaaccgcaaggacgcc
ctgcaggcccagttcgcgcgccaggtgatgggcgacacgccctggcagccgccgacctgg
tgggtgccctcgtcgcacgccttcgtttcggccacgctggccggcctgggctggaccatg
aacccgctgcccatggtccgcgaggcgctggaagacggccgcctgatgcccctgcgggcg
cgggcctggcacgacgtgccgctgtactggcagcactggcgcaccggcgcgcacaccatg
gagctgctgacctcggccgtgctgcgggccgcgcgcgccctggtgcggccggcccgcgca
ccggtcagttcccctggcgcaggcggctcagggtcgtcgtcggcgtga
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