Castellaniella defragrans: BN940_16221
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Entry
BN940_16221 CDS
T03058
Name
(GenBank) Transcriptional regulatory protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
cdn
Castellaniella defragrans
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cdn03000
]
BN940_16221
Transcription factors [BR:
cdn03000
]
Prokaryotic type
Helix-turn-helix
LacI family
BN940_16221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
LacI
Peripla_BP_1
HTH_Tnp_ISL3
HTH_38
HTH_26
HTH_31
CbiX
Motif
Other DBs
NCBI-ProteinID:
CDM25684
UniProt:
W8X199
LinkDB
All DBs
Position
3528333..3529367
Genome browser
AA seq
344 aa
AA seq
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MPSSLPTLLDVARLAGVSPATVDRVLHRRPGVRHATLQRVMKAAAELEYLPQAQLYAAMA
PPPMRLLFILPDRSSRFLQMLGEWVRHSQEHWAPFNVGCRVAPVDSFDPDALARILRRRG
RQSDGVAFIALEDPKVRDAVAELAERGIPSVTLVSDLTHSRRAAYVGLDNRAAGRTAAHL
IARFVGPSRPARIALIAGSLSYRAHEEREAGFLSLFAEQYPHMRVLGLREGYDDTRANYR
QTAALLKEHPDLAAIYNIGGGAEGIGQALKEGGRQHDIVFIGHGLTPDTRALLIDGSMDA
VINQTPLTTLLNSIRIFTNLREHRSVLSGVEATRMDVIFRENLP
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgccctcttccctgcccaccctgctcgacgtcgcccggctggccggcgtttccccggcc
acggtggaccgcgtcctgcatcggcggccgggcgtgcggcacgccaccctgcagcgcgtc
atgaaagccgccgccgagctggaatacctgccgcaggcgcagctgtacgccgccatggcg
ccgccgcccatgcgcctgctgttcatcctgccggaccgcagcagccggttcctgcagatg
ctcggggaatgggtgcggcactcccaggagcactgggcgcccttcaacgtcggctgccgc
gtcgcgccggtggacagcttcgatcccgacgccctggcccgcatcctgcggcggcgcggc
cggcagagcgacggcgtggccttcatcgccctggaggatcccaaggtgcgggacgccgtg
gccgagctggccgaacgcggcatccccagcgtgacgctggtgtcggacctgacgcactcg
cgccgcgccgcctacgtcggcctcgacaaccgggcggccgggcgcacggccgcgcacctg
atcgcccgcttcgtcgggccgtcgcggcccgccaggatcgccctgatcgctggctcgctc
agctaccgcgcgcacgaagagcgcgaggccggcttcctgagcctgttcgccgaacagtac
ccgcacatgcgcgtgctcggcctgcgggaaggctacgacgacacgcgggccaactaccgc
cagaccgccgccctgctgaaggagcacccggacctggccgccatctacaacatcggcggc
ggcgcggaaggcatcggccaggcgctgaaggaaggcggccggcagcacgacatcgtcttc
atcggccacggcctgacgcctgacacccgcgccctgctgatcgacggcagcatggatgcc
gtcatcaaccagacgccgctgaccaccctgctcaacagcatccgcatcttcaccaacctg
cgcgagcaccgcagcgtgctgtccggcgtcgaagccacgcgcatggacgtgatcttccgg
gaaaatctgccgtag
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