Castellaniella defragrans: BN940_17551
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Entry
BN940_17551 CDS
T03058
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cdn
Castellaniella defragrans
Pathway
cdn03030
DNA replication
cdn03430
Mismatch repair
cdn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN940_17551
03430 Mismatch repair
BN940_17551
03440 Homologous recombination
BN940_17551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdn03032
]
BN940_17551
03400 DNA repair and recombination proteins [BR:
cdn03400
]
BN940_17551
Enzymes [BR:
cdn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN940_17551
DNA replication proteins [BR:
cdn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN940_17551
DNA repair and recombination proteins [BR:
cdn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN940_17551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CDM25942
UniProt:
W8X5U9
LinkDB
All DBs
Position
complement(3789602..3790345)
Genome browser
AA seq
247 aa
AA seq
DB search
MRQIILDTETTGLEPEQGHRVVELACVEILNRRVTDRHLHLYLNPDRDSDPEALQVHGLT
TEFLSGHPRFPEVAQQLVDFVRDAEVIIHNAAFDVKFLNAELRRASLPPFTELCAKITDS
LMVAREMFPGKRNNLDALCERFGISNAHRTLHGALLDSELLGEVWLAMTRGQDSLLDEAP
DDAAGGAGAGAAGALGRFDVSRLPVIQVDAQALQAHEAYLDGLDKAAGKPCLWRQLEIPV
EADGVAG
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagatcatcctggataccgaaaccacgggcctggagcccgagcagggccaccgc
gtggtggaactggcctgcgtcgagatcctcaaccgccgggtcaccgaccgccacctgcac
ctgtacctgaacccggaccgcgacagcgaccccgaggcgctgcaggtccacggcctgacc
accgaattcctgtccggccacccgcgctttccggaagtcgcccagcaactggtggatttc
gtgcgcgacgccgaggtcatcatccacaacgcggccttcgacgtgaagttcctcaacgcc
gaactgcgccgcgccagtcttccgccattcaccgagctgtgcgccaagatcaccgattcg
ctgatggtggcgcgcgaaatgttccccggcaagcgcaacaacctggatgcgctgtgcgag
cggttcggcatttccaacgcgcatcgcacgctgcacggcgccttgctggactcggaactg
ctgggcgaggtgtggctggccatgacgcgcggccaggactcgctgctggacgaggcgccc
gacgatgcggcgggcggggccggcgccggcgcggccggggccctgggccgcttcgatgtg
tcccgcctgccggtcatccaggtcgatgcccaggccctgcaggcccacgaggcctacctg
gacggcctcgacaaggccgcgggcaagccctgcctgtggcgccagctcgaaatccccgtc
gaggcggacggcgtggcgggctga
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integrated database retrieval system
