Castellaniella defragrans: BN940_17781
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Entry
BN940_17781 CDS
T03058
Name
(GenBank) hypothetical protein
KO
K11720
lipopolysaccharide export system permease protein
Organism
cdn
Castellaniella defragrans
Pathway
cdn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BN940_17781
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdn02000
]
BN940_17781
Transporters [BR:
cdn02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
BN940_17781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
CDM25987
UniProt:
W8X5W6
LinkDB
All DBs
Position
3831686..3832861
Genome browser
AA seq
391 aa
AA seq
DB search
MRTARRYIAREIYRSTAVVLVALVGLFMFFALIEGLDKVGQRLTLLNLFYLQALDVPNHL
YELLPIGLLIGAVLALAGLAQRNELTILRASGVSGMRLLVALWLITIPLVLGAFVLSEFI
TPAAELRGSESRLALLGRTDGGRLSSGYWFKEADDRGGTRIINIGQLSGKGRVDDVMLYE
FAGDGALRATVQAAAGQFEQGRLVLRDLTETRIHPESADALADARIPAAPISELVHLDQR
VVPTSLTPERLIARILTPERMAISDLLDYIRYLKQNQLQTDRQEVALWRKIAYPFTLLVM
VTIAAPIGFMQTRRGGVGIKVFAGIILGVGFFMLNQLALNAGMLGDWPPWATALVPSLAG
QAAALLALLGMEHRHPLSMWLRQRRLQRSPA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacggcccgtcgctacatcgcccgcgaaatctaccgctcgaccgccgtcgtgctg
gtggcgctggtcggccttttcatgttcttcgcgctgatcgaaggcctggacaaggtcggc
cagcgcctgaccctgctgaacctgttctacctgcaggccctggacgtccccaaccacctg
tacgaactgctgcccatcggcctgctgatcggcgcggtgctggcgctggcggggctcgcg
cagcgcaacgaactcaccatcctgcgggcatcgggggtcagcggcatgcgcctgctggtg
gccctgtggctgatcaccatcccgctggtgctgggcgccttcgtcctgtcggaattcatc
accccggcggcggaactgcgcggcagcgagtcccgcctggcgctgctgggccgcaccgac
ggcggccggctgtccagcggctactggttcaaggaagccgacgaccggggcggcacccgc
atcatcaacatcggccagctctccggcaagggccgcgtcgacgacgtgatgctctacgaa
ttcgccggagacggcgcgctgcgggccaccgtccaggccgccgcggggcagttcgagcag
ggacgcctggtgctgcgcgacctgaccgagacgcgcatccaccccgaatccgccgacgcc
ctggccgacgcccgcattcccgccgcgcccatcagcgagctcgtccacctggaccagcgc
gtcgtccccacctcgctcacgcccgaacgcctgatcgcccgcatcctcacgcccgagcgc
atggcgatctcggacctgctggactacatccgctacctgaagcagaaccagctgcagacc
gaccgccaggaagtcgccctgtggcgcaagatcgcctatcccttcaccctgctggtcatg
gtcaccatcgccgcgccgatcggcttcatgcagacgcgccgcggcggggtcggcatcaag
gtgttcgccggcatcatcctgggggtgggcttcttcatgctcaaccagctggccctgaac
gccggcatgctgggcgactggccgccctgggccacggcgctggtgcccagcctggccggc
caggccgccgccctgctggccctgctgggcatggagcaccgccacccgctgtccatgtgg
ttgcgccagcgccggctccagcggagccccgcatga
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