Castellaniella defragrans: BN940_18171
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Entry
BN940_18171 CDS
T03058
Name
(GenBank) oligopeptide ABC transporter, ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
cdn
Castellaniella defragrans
Pathway
cdn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN940_18171
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdn02000
]
BN940_18171
Transporters [BR:
cdn02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
BN940_18171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CDM26064
UniProt:
W8X272
LinkDB
All DBs
Position
complement(3915382..3916491)
Genome browser
AA seq
369 aa
AA seq
DB search
MSAGRPDPSSARRSGPGRPAGVLDRGNPDGGAAAEPVLDIRGLSLEFPVFGGAVRALGGV
SLRVMPGEIVGVVGESGSGKSVTAMAALRLLPPGGYRVTGGSLRLCGEDVLAASEARMRQ
WRGRRAAMIFQEPMTALNPTRRIGDQLTGVLRAHHRLGRREAVERAAALLRDMMIPDPAR
TLRAYPFELSGGMRQRVMAAMAFSCDPALLIADEPTTALDVTVQRQVLQLLRHRARERGA
AILFITHDMAVVSQFCDRVYVMYAGTVVEQGPTARVLRAPRHPYTRGLLDGLPERAAPGA
DLASIPGRVPDMRRPPQGCVFFDRCAYADAACRQRPELRPVADAQERRVACWHPLGPDPD
PAARAAGDA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgggccggcctgatccgtccagcgcgcggcgctccggcccgggccggccggcg
ggcgtcctggatcgtgggaaccccgacggcggcgccgcagccgaacccgttctggacatc
cgcggcctgtcgctggaattccccgtcttcggcggcgcggtccgggcgctgggcggcgtc
agcctgcgcgtcatgccgggcgagatcgtcggcgtggtgggcgagtcgggttcgggcaag
tcggtcaccgccatggcggcgctgcggctgctgcccccgggcggctaccgcgtcaccggc
ggcagcctgcggctgtgcggcgaggacgtgctggccgcgtccgaagcgcgcatgcggcaa
tggcgcggacgccgcgcggcgatgatcttccaggagccgatgaccgcgctgaatccgacc
cggcgcatcggcgatcaattgaccggcgtgctgcgcgcgcaccatcgcctgggccggcgc
gaggccgtggagcgcgccgccgcgctgctgcgcgacatgatgatccccgacccggcccgg
acgctgcgcgcctatcccttcgagctgtccggcggcatgcgccagcgggtgatggccgcg
atggcgttttcctgcgatccggcgctgctgatcgccgacgagcccaccaccgcgctggac
gtgaccgtgcagcgccaggtgctgcagctgctgcgccaccgggcgcgcgagcgcggcgcc
gcgatcctgttcatcacccacgacatggcggtggtgtcgcagttctgcgaccgtgtgtac
gtcatgtacgccggcacggtggtcgagcaggggccgaccgcccgggtgctgcgcgcgccg
cgccatccctacacgcgcggcctgctcgacggcctgccggagcgcgccgcgcccggcgcc
gacctggcctcgatcccgggccgggtgccggacatgcgccggccgccgcagggctgcgtg
ttcttcgatcgctgcgcctacgccgacgcggcctgtcgccagcggcccgaactgcggccc
gtggccgacgcgcaggagcgccgggtggcctgctggcaccccctgggcccggacccggac
ccggccgcgcgggccgcgggagacgcatga
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