Corynebacterium doosanense: CDOO_01740
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Entry
CDOO_01740 CDS
T03413
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cdo
Corynebacterium doosanense
Brite
KEGG Orthology (KO) [BR:
cdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdo03032
]
CDOO_01740
03400 DNA repair and recombination proteins [BR:
cdo03400
]
CDOO_01740
Enzymes [BR:
cdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CDOO_01740
DNA replication proteins [BR:
cdo03032
]
Prokaryotic type
DNA Topoisomerases
CDOO_01740
DNA repair and recombination proteins [BR:
cdo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CDOO_01740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
HC2
Rep_1B
Motif
Other DBs
NCBI-ProteinID:
AIT60145
UniProt:
A0A097IDE8
LinkDB
All DBs
Position
320781..323741
Genome browser
AA seq
986 aa
AA seq
DB search
MTEENGAGGKTLVIVESQTKAKKIQKYLGNRYIVEASVGHIRDLPRGAADVPAKHKKEPW
ARLGVDTDNGFKPLYVVSNDKKKKVADLKSKLKQADQLFLATDPDREGEAIAWHLLEVLN
PKVPVRRMVFNEITEAAIKDAAANTRDIDDNLVDAQETRRILDRLYGYEVSPVLWKKVMP
RLSAGRVQSVATRVIVERERERMAFVAAGYWDLTADLDTGQKSGDPENPRSFQARLTGVD
GKRVAQGRDFGDDGVLKDAKGELIVVDKPTAEALASGLRDAAMTVAAVEEKPYSRKPQAP
FMTSTLQQEAGRRLHFTSERTMRIAQRLYENGHITYMRTDSTSLSAQGMSAARNQAKELY
GQNYVSDAPRRYDRKVKNSQEAHEAIRPAGERFSTPGQLSGQLDTEEFKLYELIWARTVA
SQMADARGTSMKLTITGTAATGEQTEFSATGRTITFPGFLRALSGDAGEKNDTPRLPQLS
RGDDLTVDKITADGHTTNPPARYTEASLVKKMEDLGIGRPSTYASIIKTIQDRGYVYARG
NALVPSWVAFAVVGLMESNFTSLVDYEFTSSMEDQLDAIAEGSEDRTEWLTGFYFGDADA
SDEKAEAIAKRGGLKSLIDVNLEAIDARQVNSLRLFTDSEGRDIVVRVGRYGPYIERVVG
QTKDGEPEYQRANLPEATTPDELTLEVAEKLFATPQGGRELGQNPANDRVVVAKEGRYGP
YVTEQVRDDEREKAEAEAEKVVAREREQEDAQRAEEGKRKKNWDTKTAEKQKEKRVAEIV
DELLKPSTASLFSTMDPGSVTLEEALRLLSLPREVGVDPADGELITAQNGRYGPYLKKGA
DSRSLGGEEEIFTVTLDEARRIYAEPKRRGRAAAKPPLKTLGDNDVSGKPMTVKDGRFGP
YVTDGDTNASLRRGDTPETLTDARANELLSERRAKEAADGGAPAKKTAAKKSPVKKTTAK
KTSSKKTVKKPAKTTKRVVKAGSRKK
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
gtgacggaagaaaacggcgcagggggcaagaccctcgttatcgtcgagtcgcagacgaag
gccaagaagatccagaagtacctcggcaaccgctacatcgtcgaggcctcggtcggccac
atccgcgaccttccccgcggtgccgcggacgtcccggcgaaacacaagaaggagccgtgg
gcgcggctcggcgtcgacacggacaacggcttcaagccgctgtacgtggtgagcaacgac
aaaaagaagaaggtcgccgacctcaagtcgaagctcaagcaggccgaccagctcttcctc
gcgacagaccccgaccgtgagggcgaggccatcgcgtggcacctgctcgaggtgctcaac
cccaaggtgcccgtgcgccgcatggtgttcaacgagatcaccgaggccgccatcaaggac
gccgcggcgaacacccgcgacatcgacgacaaccttgtcgatgcccaggaaacccgtcgt
atcctcgaccgcctctacggctacgaggtctcccccgtgctgtggaagaaggtcatgcca
cggctgtccgcggggcgtgtccagtccgtggccacccgtgtcatcgtcgagcgtgagcgc
gagcgcatggcgttcgtcgcggccggctactgggatctcaccgccgacctggacaccggc
cagaagtccggcgatccggagaacccccgttccttccaggcccggctgacgggcgtcgac
ggcaagcgtgtggcccagggccgcgacttcggcgacgacggtgtgctcaaggacgcgaag
ggtgagctcattgtcgtcgacaagcccaccgccgaggcgctggcctcggggctgcgggat
gcggcgatgaccgtcgcggcggtcgaggagaagccgtactcgcgcaagccgcaggcgccg
ttcatgacgtcgacgctgcagcaggaggccggtcgacgcctgcacttcacctccgagcgc
accatgcgcatcgcgcagcggctgtacgagaacggccacatcacctacatgcgtacggac
tcgacctcgctgtccgcgcagggcatgtccgccgcgcgcaaccaggccaaggaactctac
ggccagaactacgtctcggacgcgcccaggcgctacgaccgcaaggtgaagaactcccag
gaggcgcacgaggcgatccggccagcaggagagcgcttctcgacgccgggtcaactctcc
ggccagctcgacaccgaggaattcaagctctacgaactgatctgggcccgcacggtcgcc
tcgcagatggccgatgcccggggcacctcgatgaaactcaccatcacgggcaccgccgcc
accggcgagcagaccgaattctccgccaccggccgcaccatcaccttccccggtttcctc
cgggcactctccggcgacgcgggggagaagaacgacaccccgcgtctgccccagctgagc
aggggcgacgacctgaccgtggacaagatcaccgcggacgggcacaccaccaacccgccg
gcgcgctacaccgaggcttccctggtgaagaagatggaggacctgggcatcggtcgcccg
tcgacgtacgcgtcgatcatcaagacgatccaggaccgcggttacgtctacgcccggggt
aacgctctcgtgcccagctgggtcgcgttcgccgtggtggggctcatggagtccaacttc
acctcgctggtggactacgagttcacctcctcgatggaggatcagctcgacgccatcgcc
gagggttccgaggaccgcacggagtggctcaccggtttctacttcggtgacgcggacgcc
agcgacgagaaggcggaggcgatcgccaagcgcggcggtctgaagtcgctcatcgacgtc
aacctcgaggccatcgacgcccgtcaggtcaactccctgcggctgttcaccgactccgag
ggccgcgacatcgtcgtgcgtgtcggccgctacggcccgtacatcgagcgtgtcgtcggc
cagacgaaggacggcgagcccgagtaccagcgcgccaacctccccgaggccaccaccccg
gacgagctcaccctcgaggtggcggagaaactcttcgccaccccgcagggcgggcgcgag
ctcggccagaacccggcgaatgaccgtgtcgtggtggccaaggagggccgctacggcccc
tacgtcaccgagcaggtgcgtgacgacgagcgtgaaaaggccgaggcagaggcggagaag
gtcgtcgcccgcgaacgcgagcaggaggacgcgcagcgcgccgaggaaggcaaacgtaag
aagaactgggacaccaagaccgcggagaagcagaaggagaagcgagttgcggaaatcgtc
gacgagctgctcaaaccctccaccgcgtcgctgttctccaccatggatcccggctcggtg
accctcgaggaggcgctgcgcctgctgtcgctgccccgcgaggtcggcgtcgaccctgcc
gacggtgagctcatcaccgcgcagaacggccgttacggcccgtacctgaagaagggcgcg
gactcccgctctctcggtggcgaggaggagatcttcaccgtcacgctcgacgaggcccgg
cgcatctacgccgagccgaagcgtcgagggcgcgccgccgcgaagccgccgttgaagacc
ctcggcgacaatgacgtctccggcaagcccatgaccgtcaaggacggccgcttcggcccg
tacgtcacggacggcgacaccaacgcgtcgctacgccgcggcgacaccccggagacactc
accgacgcccgtgccaacgagctgctctccgagcgtcgcgcgaaggaggccgccgacggc
ggggctccggcgaagaagacggcggccaagaagtctcccgtgaagaagacgacggcgaag
aaaacctcctcaaaaaagaccgtgaaaaagccggccaagaccaccaagcgtgtggtcaag
gccggctcccggaagaagtag
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