Corynebacterium doosanense: CDOO_03025
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Entry
CDOO_03025 CDS
T03413
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cdo
Corynebacterium doosanense
Pathway
cdo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cdo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CDOO_03025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdo03021
]
CDOO_03025
03400 DNA repair and recombination proteins [BR:
cdo03400
]
CDOO_03025
Enzymes [BR:
cdo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CDOO_03025
Transcription machinery [BR:
cdo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CDOO_03025
DNA repair and recombination proteins [BR:
cdo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CDOO_03025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AIT60333
UniProt:
A0A097IDW2
LinkDB
All DBs
Position
567456..568472
Genome browser
AA seq
338 aa
AA seq
DB search
MLISERPTLTEEFIDSARSRFVIEPLEPGFGYTLGNSLRRTLMSSIPGAAVTSIKIDGVL
HEFTTINGVKEDVIEIILNVKSMVLSSDSDEPVVMYLSKEGPGAVTAGDIQPPAGVEIHN
PDLHIATLNEQAKLDIELIVERGRGYVPAAANSTTADIGRIPVDQIYSPVLKVSYKVEAT
RVEQRTDFDKLVIDVETKNSISARDALASAGGTLVELFGLARELNTAAEGIEIGPSPQET
EYIAAYGMPIEDLNFSVRSYNCLKRQEIHNVGELAECTESDLLDIRNFGQKSINEVKIKL
AQLGITLKDAPEDFDPSELEGYDAETGGYVDPSGEDSE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgctcatctcagagcgccccaccctcaccgaggagttcatcgactccgctcgttcgcgt
ttcgtcatcgaaccgctcgagcctggtttcggctacaccctcggtaactccctgcgtcgc
acgctgatgtcgtccattccgggcgcagcagtgaccagcatcaagatcgacggtgtgctc
cacgagttcaccacgatcaacggtgtcaaggaggatgtcatcgagatcatcctcaacgtc
aagagcatggtgctgtcctccgactcggatgagccggtggtcatgtacctctccaaggag
ggcccgggcgccgtcaccgccggcgacattcagccgccggccggcgtggagatccacaac
ccggatctgcacatcgcgactctgaatgagcaggccaagctggacatcgagctcatcgtc
gagcgtggacgtggctacgtccccgccgccgcgaactcgaccacggcggacatcggccgg
atcccggtcgaccagatctactccccggttctcaaggtcagctacaaggtcgaggcaact
cgtgtcgagcagcgcaccgactttgacaagctggtcatcgacgtggagaccaagaactcg
atttccgcccgtgacgccctggcgtccgccggtggaaccctggtggagctgttcggactc
gctcgcgagctcaacaccgccgccgagggtatcgagatcggcccgtccccgcaggagacc
gagtacatcgccgcctacggcatgcccatcgaggacctcaacttctcggtgcgcagctac
aactgcctgaagcgccaggagatccacaacgtcggtgagctcgcagagtgcaccgagtcc
gatctgctggacatccgcaacttcggacagaagtccatcaacgaggtcaagatcaagctg
gctcagctgggcatcacgctcaaggatgcgccggaagactttgacccgtcggagcttgag
ggctacgacgctgagaccggcggttacgtcgaccccagcggcgaagattccgagtag
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