KEGG   Corynebacterium doosanense: CDOO_03770
Entry
CDOO_03770        CDS       T03413                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cdo  Corynebacterium doosanense
Pathway
cdo03420  Nucleotide excision repair
cdo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cdo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CDOO_03770
   03430 Mismatch repair
    CDOO_03770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cdo03400]
    CDOO_03770
Enzymes [BR:cdo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CDOO_03770
DNA repair and recombination proteins [BR:cdo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CDOO_03770
   MMR (mismatch excision repair)
    Other MMR factors
     CDOO_03770
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 AAA_30
Other DBs
NCBI-ProteinID: AIT60469
UniProt: A0A097IEB2
LinkDB
Position
719376..722621
AA seq 1081 aa
MAKITPEQLSAVIHGNGRAPTDQQSEVTAAPTGPMLVVAGAGAGKTETMASRVIWLVANG
FATPDQVLGLTFTRKAAQELGRRIRTQFHTLAGSPAARDLDPTGGLSDLLVTHPAEVSTY
DSYAGNLIREYGLLVPVEPHARLITQAELYSIAHQVVTDYSGSLSTDVTVPTVTGNLLEL
ITEMDNELLTIDEVAERSQEMITTVHELPKGPRQKDELNADMKKWVDKQQVRLDFLPLVV
RLKEELNNRGVVTFNEQMSVAARLVRDHPAVAASQRRRFRVVMLDEYQDTSHAQRILLSH
LFGTPEGSAAAPDPSLTVTAVGDPMQAIYGWRGATVENLEEFVNDFPTEEGPAVKRQLTT
SWRNPGEVLDMANQVSEGVFFPDGASSGSERPVAELQPKPGAHSAEVRLAHYATEEEEIE
AAADRLAQHFREITGRGEKFTGAVLIRKNKHAAPIAEALAARNVPHEILGVGGLLDVAEI
ADLVAIATMLIRPSDGQAALRILGGPIVGLGLADIVALQNRARNLNGSTQREEEPVDPTE
RLKAQLAAATAEQPDQIAGLADAVADLGEHSRYSEEGLRRLQGLASKLRYLRSYSLGKSL
ADLFSDIETVFDIRTEVLARPDSHVNGGAVHLDRFADVVSDFHGDSLAALLDYFALAKEH
EKGLEPGEVTVRSDRVQILTVHKAKGLEWDVVAVLHTDKTTYAAQASTYLSNAHILPDAG
ASERYAEATNRKEFQDDGEEFITSERHKVAEENARLFYVAITRTERVLMVTASGKDPYGP
FAELARAFPEYVETWAADDSALDGAEENDEDNTDQAADEPETGLFPHLPIRPGVMDGAAA
VHAALEAQPEQAAGETFDFWEREVTALIEEHEALQAPVVDVELPGELTATDMVSIKSDPV
QFAKRQRRPVPFKPITYAKRGTEFHQWLEDRFGGQALLDEDQLPGIGEEVVDAAHLEELR
RYFLASPWAERVPERVEHPFEVAIGTTMVRGRMDAVFREADGTWLIVDWKTGRFPTGPAL
RSAEIQLAVYREAWRRQVGEDEKVSAAFFYVSTGETFAPRSLPGGEELADLLSDAASSPE
D
NT seq 3246 nt   +upstreamnt  +downstreamnt
atggctaaaatcaccccggagcagctgtccgcggtcatccacggaaacggccgcgccccc
accgatcagcagtccgaagtcaccgcggcccccaccgggccgatgctcgtcgtcgccggt
gccggagcgggcaagaccgagaccatggcctcccgggtgatctggctggtggccaacggt
ttcgccaccccggaccaggtgctaggcctgaccttcacccgcaaggcggcgcaggaattg
ggccgccggatccgcacccagttccacaccctggccggcagcccggcagcgcgcgacctc
gatcccaccgggggtctctccgacctgctggtcacgcacccggcggaggtgtccacttac
gactcgtacgcgggaaacctcatccgcgaatacgggctgctggtccccgtcgaaccccat
gcccgcctcatcacccaggcagagctgtactccatcgcccaccaggtggtcaccgactac
tccggcagcctgtccacggacgtcaccgttcccaccgtgaccgggaatctgctcgaactc
atcacggagatggacaacgagctgctcaccatcgacgaggtcgccgagcgctcccaggag
atgatcaccaccgtccacgagctgccgaagggacccaggcagaaggacgaactgaatgcg
gacatgaagaagtgggtggataaacagcaggtccggctggacttcctgcccctggtcgtc
cggttgaaggaggagctcaacaaccggggcgtggtgaccttcaacgagcagatgtccgtc
gccgcccggctcgtgcgggatcaccccgcggtggcggcgtcccagcggcgccggttccgg
gtggtcatgctcgacgagtaccaggacacctcccatgcccagcggatcctgctgtcccat
ctcttcggcaccccggaaggatcggccgcggcgccggacccgtccctcaccgtcacggcg
gtgggtgatcccatgcaggccatctacggctggcgcggggccacggtggagaacctggag
gagttcgtcaacgactttcccaccgaggaggggccggcggtcaaacgccagctgaccacg
tcctggcgcaaccccggtgaggtactcgacatggccaaccaggtctccgagggagtgttt
ttcccggacggggcctccagtggcagcgagcggcccgtggcagagctgcagccgaaacca
ggcgcgcacagcgcggaggtgcgcctggcgcactacgccaccgaggaggaggagatcgag
gcggccgccgaccggctcgcgcagcacttccgggagatcaccggccggggagagaagttc
accggcgcggtgctcatccgcaagaacaagcacgcagcacccatcgcggaggcgctggcc
gcacggaacgtgccccacgagatcctcggggtcggcgggttgctggatgtggcggagatc
gccgacctcgtcgccatcgcgacgatgctcatccgtcccagcgacgggcaggccgcgctg
cgcatcctgggtggcccgatcgtgggcctggggctggcggacatcgtggcgctgcagaac
cgggcgcgcaacctcaacggcagcacgcagagggaggaggagcccgtggacccgaccgag
cgcctcaaggcgcagcttgccgcggccaccgccgaacagccggaccagatcgccgggctc
gccgacgccgtcgccgacctcggggagcattcgcgttattccgaggagggcctgcggcgg
ctgcaggggctcgcgtccaagctgcgctacctgcgctcctacagcctgggtaagtccctg
gcggacctgttcagcgacatcgagaccgtctttgacatccgtaccgaggtcctcgcgcgt
ccggattcccacgtcaacggaggtgcggtacatctggaccgtttcgcagacgtggtctct
gatttccacggggattccctcgctgccctgctggactactttgcgctggccaaggagcac
gagaagggcctggaaccgggagaggtcacggtgcgttctgaccgggtgcagatcctcacc
gtgcacaaggccaagggcctggagtgggatgtcgtcgcagtcctgcacacggacaagacc
acctacgcggcccaggcctccacctacctctccaacgcccacatcctccccgatgcggga
gcttcagagcgttacgccgaggctacaaaccgtaaggagttccaggacgacggcgaggag
ttcatcacttccgagcggcacaaggtcgccgaggagaacgcccgtctgttctacgtcgcc
atcaccaggactgagcgggtgctcatggtgaccgccagtggcaaggatccctacggaccc
ttcgccgaacttgcgcgagccttccccgaatacgtggaaacctgggcggccgatgacagt
gccctcgacggggccgaggagaacgacgaggacaacaccgatcaggccgccgacgagccc
gaaaccgggctgtttccccacctgcccatccgccccggggtaatggacggcgcggcggcc
gtgcacgctgcactcgaggcacagcccgaacaggcggccggggagaccttcgacttctgg
gaacgcgaggtcaccgcgttgattgaggagcatgaggccctgcaggcgcccgtcgtcgac
gtcgagctgcccggtgaactcacggccacggacatggtctccatcaagtctgaccccgtg
cagttcgccaaacgccagcgccggccggtcccgttcaaacccatcacctacgccaagcgg
ggcaccgagttccaccagtggctcgaggaccgcttcggtgggcaggccctgctcgatgag
gaccagctgccgggcatcggggaggaggttgtcgacgcggcccacctggaggagctgcgc
cgctacttcctggccagcccgtgggcggagcgggtcccggagcgggtcgagcacccgttt
gaggtggccatcggcaccacgatggtccgcggtcgcatggacgcggtgttccgagaggcc
gacgggacctggctcatcgtcgactggaagaccggcaggttccccaccggcccggcgctg
cgttcggccgagatccagctggcggtgtaccgggaggcatggcgccggcaggtgggggag
gacgagaaggtgtccgccgcgttcttctacgtctccaccggggagaccttcgcgccgcgg
tccctcccgggcggggaggagctcgcggacctgctgagcgacgctgcctcctcccccgag
gactag

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