Corynebacterium doosanense: CDOO_03785
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Entry
CDOO_03785 CDS
T03413
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cdo
Corynebacterium doosanense
Pathway
cdo03420
Nucleotide excision repair
cdo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CDOO_03785
03430 Mismatch repair
CDOO_03785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdo03400
]
CDOO_03785
Enzymes [BR:
cdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDOO_03785
DNA repair and recombination proteins [BR:
cdo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDOO_03785
MMR (mismatch excision repair)
Other MMR factors
CDOO_03785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
Helicase_Sgs1
HHH
DUF6011
Motif
Other DBs
NCBI-ProteinID:
AIT60472
UniProt:
A0A097IEB6
LinkDB
All DBs
Position
724563..726608
Genome browser
AA seq
681 aa
AA seq
DB search
MINLEELDPDQRVAATAPRGPVCILAGAGTGKTRTITYRIAHLVDSGFVGQHRVLAVTFT
NRAAGEMRDRLTQMGIGAVQARTFHAAALRQLRYFWPQVAGDLPWRLLDNKFPLVGRATR
SVGLESSTDNVRDLLGEIEWAKATLITPESYPERVGAFDRTPPFDPAKVAEVYRRYEDSK
TTEEGMLLDFDDLLLHVAGALENAPAVAEEFHQQYRSFVVDEYQDVTPLQQRVLEAWLGE
RDDLTVVGDANQTIYSFTGATPEYLLNFSRTYENATVVKLQRDYRSTPQVTDLANTVIAK
ASGRMAGTRLELQGMRAPGPEPQFHTYDDEPTEAREVAGQILTLLNDGVPASEIAVLYRI
NAQSQAFETALADAGIVYQVKGGEGFFYRPEIRQAVTELTKASRRNDLPDDPVAIARAAL
VPLGFSANEPEGAQARERWQSLNALVELVEEIVRGTPGIDLLGVLASLRQRAESKQPPTM
QGVTLASLHAAKGLEWDAVFLVGLVDNTLPISHAIKAGDHQIEEERRLFYVGITRAREHL
HLSHALARQEGGRKSRKSSRFLEGIAPASASAVASGRADRPKRCSVCGKPLNTPGEKVLG
RHEECPSGADEKVFETLRSWRADVAKEENVPAYIIFSDATLMAVAEALPANENELLGVSG
IGPVKVERYGGDLLGVLHQFR
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacctcgaggaactggacccggatcagcgcgtcgccgccacggccccgcgcgga
ccggtgtgcattctcgctggtgcgggaacaggcaagacccgcacgatcacctaccgcatc
gcgcacctggtggactcgggattcgtcggtcagcaccgtgtgctggccgtgaccttcacc
aaccgtgccgcgggggagatgcgtgaccggctcacgcagatgggcatcggcgccgtgcag
gcgcgcaccttccacgccgccgcactgcggcagctgcgctacttctggccgcaggttgcc
ggcgatctgccctggcgtctgctggacaacaagtttccgctggtgggccgggcaacccgg
tctgtcggcctggaatcctccacggacaacgtgcgtgacctgctcggcgagatcgagtgg
gccaaggccacgctcatcacgccggagagttacccggaacgggtcggggccttcgaccgc
accccgcctttcgatcccgcgaaggtcgcggaggtctatcggcgctacgaggactccaag
accacggaggagggcatgctgctcgacttcgatgacctcctgctgcacgtcgccggcgcc
ctggagaacgccccggccgtggcggaggagttccatcagcagtaccgctcgtttgtcgtc
gacgagtaccaggacgtcaccccgctgcagcagcgggtgctcgaggcgtggctgggggag
cgtgacgacctcaccgtcgtcggcgacgcgaaccagaccatctactccttcaccggggct
accccggagtatctgctcaacttctccaggacgtacgagaacgcgaccgtcgtcaagctc
cagcgggactaccggtcgacgccgcaggtcacggacctggccaacacggtgatcgccaag
gcgagcggccggatggctggcacgcgcctcgagctgcagggcatgcgcgcccccggcccc
gagccgcagttccacacctacgacgacgagccgaccgaggcgcgggaggtcgccggccag
attctcacgttgcttaacgacggcgtccctgccagcgaaatcgccgtgctctaccgcatc
aacgcccagtcgcaggcgtttgagaccgcgctggcggacgccggcatcgtctaccaggtc
aagggcggggagggtttcttctaccgcccggagatccgccaggccgtgaccgagctgacc
aaggccagccggagaaatgacctgccggatgacccggtggccatcgcccgggcggcgctc
gttcccctgggcttcagcgcgaacgagcccgagggtgcgcaggcccgcgagcgctggcag
tcgctgaacgcgctggtggagctcgtcgaggagatcgtgcgcggcacgccggggatcgat
ctgctcggggtgctcgccagcctgcgccagcgggcggagtcgaagcagccccccaccatg
cagggagtgaccctggccagcctccacgcggccaagggcctggagtgggacgcggtcttc
ctcgtcgggctggtggacaacaccctgcccatctcgcatgcgatcaaggcgggtgaccat
cagatcgaggaggaacgccgcctgttctacgtgggcatcacgcgtgcccgcgagcacctg
cacctctcccacgccctcgcccgccaggagggtgggcgcaagtcgcgcaagagttcccga
ttcctcgagggcatcgccccggcatccgcgtcggcggtggcctcggggcgtgcggaccgg
ccgaagcgctgctcggtgtgcggtaaacccctgaacaccccgggcgaaaaggtgctgggc
aggcacgaggagtgcccgtcgggtgcggacgagaaagtcttcgagaccttgcggtcctgg
cgggccgacgtggccaaggaggagaacgtccccgcctacatcatcttctccgacgccacc
ctcatggccgtcgccgaggcgctaccggcgaacgagaacgagctgctgggcgtctccggc
attggaccggtgaaggtcgagcgctacggcggcgacctgctgggagtgctgcaccagttc
cgctag
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