| Entry |
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| Name |
(GenBank) ATP-dependent DNA helicase RecQ
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| KO |
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| Organism |
cdo Corynebacterium doosanense
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cdo00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDOO_04430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cdo03019]
CDOO_04430
03400 DNA repair and recombination proteins [BR:cdo03400]
CDOO_04430
Enzymes [BR:cdo01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDOO_04430
Messenger RNA biogenesis [BR:cdo03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CDOO_04430
DNA repair and recombination proteins [BR:cdo03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CDOO_04430
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
854222..856297
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| AA seq |
691 aa
MGQNIALKTDADALLAAIAGPGAALRDDQWAAIDALVNDHRRMLVVQRTGWGKSAVYFIA
AKLLRQAGRGPSLIISPLLALMRNQVDAASKAGIRAATLNSANMTEWQGIEDQVRRGEID
VLLVSPERLNNPQFRETVLPGLAETVGMVVVDEAHCISDWGHDFRPDYRRIRDLLAELRP
EVPVLATTATANDRVVADVQAQLGEGTGVLRGGLDRASLHLSVVELEDSRRRPAWVATVL
EQLEGSGIIYCLTVSAAEDLAEALETAGWTVASYTGRTEAGERERLEKALIGNELKALVA
TSALGMGFDKPDLGFVIHFGAPSSPVSYYQQVGRAGRGTDHADVILLPGSEDQAIWDYFA
SVSFPDEATVRTLLNALGHEAQSTPKLESSVDLSRSRLEQTLKVLDVDGAVSRVQGGWIS
TGQPWSYDATRYAAVDAARTNEQNAMVEYEKTEECRMLYLRRQLDDTTATEPCGRCDNCT
GRTWDVTVDARLEERIDARLTAPGVRLTARKQWPTGISVRGKIAGVEAGRALGRLNDVAR
GPALRALLAEPGWRPTSPWKQDTWLPRIVAVLADWDWSERPVAVVALGQVDPERTAFLAA
LAEAVAAVGRMEYAGVLEVAPNAVEVTAQNSAYRVRGLLDHWDYSSAPAGEGPVLLLTDV
VETGWSVTVAGHGIHERTGRTVLPLAVASRG |
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| NT seq |
2076 nt +upstreamnt +downstreamnt
atgggacagaacattgcactgaagaccgacgccgacgccttgttggcggccatcgcgggg
ccgggggccgcgcttcgcgacgaccagtgggccgccatcgacgccctggtcaatgaccac
cgacgcatgctggtggtgcagcgcaccggctggggaaagtccgccgtctacttcatcgcc
gccaaactcctgcgccaggccggccgggggcccagcctgatcatttccccgctgctcgcg
ctcatgcgcaaccaggtcgacgcggcatcgaaggcgggcatccgcgcggcgacgttgaac
tccgcgaacatgaccgagtggcagggcatcgaggatcaggtgcgccgcggtgagatcgac
gtgctgctggtcagccccgagcgcctgaacaacccgcagttccgggagaccgtcctgccc
ggtctggcggagaccgtgggcatggtcgtggtggacgaggcgcactgcatctccgattgg
gggcacgacttccggcccgactaccgccgcatccgcgatctgctcgccgagctgcgcccc
gaggttcccgtgctggccaccacggccacggcgaacgaccgcgtggtggccgacgtccag
gcacagctcggcgagggcaccggcgtgctgcgcggcggcctcgaccgcgcgtcactgcac
ctctccgtggtcgagttggaggattctcggcgccgcccggcctgggtggctaccgtcctg
gagcagctggagggctcgggcatcatctactgcctcaccgtctcggcggcggaggatctc
gccgaggccctggagaccgccggctggaccgtcgcctcctacaccgggcgtacggaagcg
ggggagcgtgagcggctggagaaggcgctgatcggcaacgagctcaaggccctggtggcc
accagcgcgctgggcatgggattcgacaaacccgacctcgggtttgtcatccacttcggc
gccccgagctcaccggtgtcctactaccagcaggtcggccgcgccgggcgtggcacagac
cacgccgatgtcatcctcctgccgggttcggaggaccaggcgatctgggattacttcgcc
tccgtctccttccccgacgaggcgacggtgcgcaccctgctcaacgccctgggccacgaa
gcacagtcgacgccgaagctggagtcctcggtggatctctcccgctcccgcctggagcag
accctgaaggtgcttgacgtcgacggcgccgtcagccgcgtccagggcggatggatctcc
accggccagccatggtcctacgacgccacgcgctacgcggcggtggacgctgcccgcacc
aacgagcagaacgccatggtggagtatgagaagaccgaagaatgccggatgctctacctg
cgccggcaacttgacgacacgaccgccaccgaaccctgcggacgctgcgacaactgcacg
ggccgcacctgggacgtcacggtggacgcgcggctagaagagcgtatcgacgcccgcctc
accgcccccggcgtgcgactgaccgcccgcaagcagtggccgacgggcatctccgtgcgc
ggcaagatcgccggcgtcgaggccggccgggcactgggcaggctcaacgacgtcgcccgc
gggcccgcccttcgtgcgcttctcgctgagccggggtggaggccgacgagtccctggaag
caagacacgtggctgccgcgcatcgtcgcggtgctggctgactgggactggtccgagcgg
cccgtcgccgtagtggcattggggcaggtcgacccggagcgtacggcgttcctggccgcg
ctggccgaggccgtcgccgcggtcgggcggatggaatacgccggggtgctggaggtcgcg
ccgaacgccgtcgaggtcaccgcgcagaactcggcctaccgcgtgcgtgggctgctggac
cactgggactactcttcggcacccgcaggtgagggcccggtgctgctgctgaccgatgtg
gtggagacaggctggtcggtgaccgtcgccgggcacgggatccacgagcgcaccgggcgg
acggtgttgccgctcgcggtggcgagtagggggtag |
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