KEGG   Corynebacterium doosanense: CDOO_06735
Entry
CDOO_06735        CDS       T03413                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
cdo  Corynebacterium doosanense
Pathway
cdo03030  DNA replication
cdo03410  Base excision repair
cdo03420  Nucleotide excision repair
cdo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cdo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CDOO_06735
   03410 Base excision repair
    CDOO_06735
   03420 Nucleotide excision repair
    CDOO_06735
   03440 Homologous recombination
    CDOO_06735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cdo03032]
    CDOO_06735
   03400 DNA repair and recombination proteins [BR:cdo03400]
    CDOO_06735
Enzymes [BR:cdo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CDOO_06735
DNA replication proteins [BR:cdo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CDOO_06735
DNA repair and recombination proteins [BR:cdo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CDOO_06735
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CDOO_06735
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_lambd_f HHH_5 HHH_2 SBP_bac_8 DUF1615 NYN_YacP
Other DBs
NCBI-ProteinID: AIT60981
UniProt: A0A097IFR6
LinkDB
Position
1326113..1328740
AA seq 875 aa
MLIDGHSMAFRAFYALPAENFSTTGGQHTNAVYGFLSMLANIIAEEQPDHVGVAFDVGRK
TFRTEMFPEYKAQREAAPPEFKGQVTIIDEVLQTLGITTMSVENYEADDIIATLVTAAKQ
SDYEILIVTGDRDYLQLVDDSTTVLYPMRGVSTLHRFTPAAVEEKYGLTPQQYPEFAALR
GDPSDNLPNIPGVGEKTATKWIQEYGTLDELIAHADDIKGKAGDSFRERIDQVKMNRTLT
AMVTDMELAVGPDDLDLKPAKVSEIAERFDELEFGTNLRERILSAVPTDNSSPAEAVVEL
GDVVIDEGPLDEWLEPRSGQGLALYVTGNAQPARGDTTAMGIVDKQRHAVAVELAELSPD
EEKALAAWLSSADPKYLHGAKAVFHMLAGRGFELAGIAHDTAIAAYLLRPGQRTYELGDV
YQRHLQRQRSEPDGQMSLMGDTSLTDSAAAILELAEELTRQLQDIDSFELYRDLELPLVD
ILARMEAAGIAADVTVLEDQLKTFTQQVADVEEHARGLVEKPDLNLSSPKQLQEVLFEQL
GLPKTKKTKTGYSTAAKEVEQLAVKHPHPFLDDLLAHREYQKMKSTLEGLIKTVLDDGRI
HTTFNQTVASTGRLSSTEPNLQNIPVRTEAGRRIRSAFTVGEGYECLLTADYSQIEMRVM
AHVSQDPGLIEAYKEGEDLHNFVGSRVFDVPIDQVTPELRRRVKAMSYGLAYGLSAFGLS
QQLDIPAGDAKAIMENYFERFGGVRDYLTAVVEQARKDGYTSTVFGRRRYLPELNSDNRI
ARENAERAALNAPIQGTAADIIKVAMIRVEREFRAQDVKSRVLLQVHDELVVEVAPGELE
KVTAIVEKEMDGAITLRVPLEVSAGTGQNWDEAAH
NT seq 2628 nt   +upstreamnt  +downstreamnt
ctgctgatcgacggccactccatggcgttccgggccttctacgccctacccgcggagaac
ttctccaccaccgggggccagcacaccaacgcggtctacggtttcctgtcgatgctggcc
aacatcattgccgaggagcagccggaccacgtcggcgtggccttcgacgtcgggcgcaag
accttccgcaccgagatgttcccggagtacaaggcccagcgcgaggccgccccgcccgag
ttcaagggtcaggtgaccatcatcgacgaggtgctgcagaccctgggcatcaccacgatg
agtgtagagaactacgaggccgacgacatcatcgccacgctggtcaccgcggcgaagcag
tccgactacgagatcctcatcgtcaccggcgaccgcgactacctgcagctcgtggacgac
tccaccaccgtgctctacccgatgcgcggggtgtccaccctgcaccgcttcactcccgcg
gccgtggaggagaagtacgggctcacgccgcagcagtacccggagttcgcggcgctgcgt
ggcgatccctccgacaacctgcccaacatccccggggtgggcgagaagacggccaccaag
tggatccaggagtacggcaccctggacgagctcatcgcccacgccgacgacatcaagggc
aaagctggcgactcgttccgcgagcgcatcgaccaggtgaagatgaaccgcacgctcacc
gcgatggtcaccgacatggagcttgcggtgggccccgacgacctcgacctcaaacccgcg
aaggtttcggagatcgccgagcgtttcgacgagctcgagttcggcaccaacctccgcgag
cgcatcctctccgccgtgcccaccgacaactcctcgcccgccgaggcagtggtcgagctc
ggcgacgtcgtcatcgacgaaggcccgctcgacgaatggctggagccacgctccggtcaa
ggcctcgccctttacgttaccggcaatgcgcagcccgcccgcggcgataccacggcgatg
gggatcgtcgataagcagcgccacgccgtggccgtggaactggcggagctatccccggac
gaggagaaggcgttggccgcgtggctgtcctccgcagaccccaagtacctgcacggtgcc
aaggccgtgttccacatgctggcgggacgtggtttcgagctcgccgggatcgcccacgac
acggccatcgcggcgtacctgctgcgcccgggccagcgcacctacgagctcggcgacgtc
taccagcgtcatctgcagcgccagcgctccgagcccgacggccagatgtcgctcatgggc
gacacctcgctcaccgattccgccgcggcgatcctcgagctcgctgaggagctgacccgg
cagctgcaggacatcgacagcttcgagctctaccgcgacctggagctgcccctggtggac
atcctcgcccggatggaggccgcgggcatcgcggccgacgtcaccgtgctcgaggaccag
ctcaagaccttcacccagcaggtcgctgacgtggaggagcatgctcgggggctcgtcgag
aagcccgacctcaacctgtccagcccgaagcagctgcaggaggtgctcttcgagcagctc
ggcctgcccaagacgaagaagaccaagacgggctactccaccgcggcaaaggaggtcgag
cagctcgcggtcaaacatccgcatccgttcctcgacgacctgctcgcgcaccgcgagtac
cagaagatgaagtccacgctcgagggcctgatcaagaccgtgcttgacgacggccgtatc
cacaccacgttcaatcagaccgtcgcctccaccgggcgcctgtcctccaccgagccgaac
ctgcagaacatccccgtgcgcaccgaagccggccgccgcatccgctcggcattcaccgtc
ggcgaagggtacgaatgcctgctcaccgccgactactcgcagattgagatgcgggtcatg
gcgcacgtgtcgcaggaccccgggctcatcgaggcgtacaaggagggcgaggacctgcac
aacttcgtcggctcccgggtgttcgacgtgcccatcgaccaggtcaccccggaactgcgc
cgccgcgtcaaggccatgagctacggcttggcgtacgggctcagcgccttcggactgtcc
cagcagctggacatcccggccggcgacgccaaggccatcatggagaactactttgaacgc
ttcggcggggtgcgcgactacctcaccgcggtcgtcgagcaggcgcgcaaggacggctac
acctccaccgtcttcggccgtcgtcgctatctgcccgagctaaactccgacaaccgcatc
gcccgggagaacgcggagcgcgccgcgctcaacgcgccgatccagggcacggccgcggac
atcatcaaggtggcgatgatccgggtggagcgggagttccgcgcgcaggacgtgaagtca
cgcgtgctgctgcaggtgcacgacgaactagtcgtcgaggtggctccgggcgagctggag
aaggtcaccgccatcgtggagaaggagatggacggcgcgatcaccctgcgcgtgccgctc
gaggtgtcggcgggcaccgggcagaactgggacgaggccgcccactaa

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