Corynebacterium doosanense: CDOO_08685
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Entry
CDOO_08685 CDS
T03413
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cdo
Corynebacterium doosanense
Brite
KEGG Orthology (KO) [BR:
cdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdo03016
]
CDOO_08685
Enzymes [BR:
cdo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CDOO_08685
Transfer RNA biogenesis [BR:
cdo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CDOO_08685
Prokaryotic type
CDOO_08685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AIT61328
UniProt:
A0A097IGP3
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All DBs
Position
1724301..1725194
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AA seq
297 aa
AA seq
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MTESLSRSGLVVVDKPAGMTSHDVVSRLRRIMGTRKVGHAGTLDPMATGVLVAGIERGTK
FLAHMVAATKAYDATIRLGAATSTDDAEGSVLSTADSDSLIDDALHASLDKLRGEIMQRP
SSVSAIKIDGKRAHERVRDGETVDIPARPVTIHRLDVLDIRREDGFVDVDVSVGCSSGTY
IRSLARDLGEDLGVGGHLTALRRTEVGPFLLADARTLEELEDSPRLSLSLDEALTRSYPS
ISVTDDEAAALAMGKWLEPRGLVGVHAAVAPDGRAVALIAEKGKRLSTVFVARPSTL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaatcgctctcccgttccggactcgtcgtcgtggacaaacccgccggcatgacg
tcgcacgatgtcgtcagccgcctgcgccgcatcatgggcacccgcaaggtcggccacgcg
ggcaccctcgaccccatggccacgggcgtgctcgtcgccggcatcgagcgtggcacgaag
ttcctcgcccacatggtcgcggccacgaaggcctacgacgccaccatccgcctcggtgcc
gcgacctcgaccgacgacgccgagggatcggtgctgtccactgcggactcggactcgctt
atcgacgacgccctccacgcctccctggacaaactacggggcgagatcatgcagcgtccg
tcctcggtctccgcgatcaagatcgacggcaaacgtgcccacgaacgggtccgcgacggc
gagaccgtggacatcccggcccgcccggtcaccatccaccgcctcgacgtgctggacatc
cgccgcgaggacggattcgtggacgtcgacgtctccgtgggctgctcctcgggcacctac
atccgctcgctcgcgcgcgacctgggtgaggacctcggggtgggaggtcatctcaccgcc
ctgcggcgcaccgaggtggggccgttcctgctcgccgatgcccgcaccctggaggagttg
gaggattcaccccgattgtcactctcgctggatgaggcgttgacgaggtcatacccgtcg
ataagcgtcaccgacgacgaggctgcggccctggccatgggcaagtggctggagccgcgg
gggctggtcggggttcacgccgccgtggcccccgacgggcgggcggtggcgctcatcgcg
gagaagggcaagcgcctgtccacggtgtttgtggcgcggccgtcgacgttgtag
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