Corynebacterium doosanense: CDOO_09240
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Entry
CDOO_09240 CDS
T03413
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cdo
Corynebacterium doosanense
Pathway
cdo03030
DNA replication
cdo03430
Mismatch repair
cdo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CDOO_09240
03430 Mismatch repair
CDOO_09240
03440 Homologous recombination
CDOO_09240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdo03032
]
CDOO_09240
03400 DNA repair and recombination proteins [BR:
cdo03400
]
CDOO_09240
Enzymes [BR:
cdo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CDOO_09240
DNA replication proteins [BR:
cdo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CDOO_09240
DNA repair and recombination proteins [BR:
cdo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CDOO_09240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
PTCB-BRCT
Phage_cement_2
BRCT
Motif
Other DBs
NCBI-ProteinID:
AIT61427
UniProt:
A0A097IH53
LinkDB
All DBs
Position
1842558..1844006
Genome browser
AA seq
482 aa
AA seq
DB search
MISAHGSTVTVTTSSVTVHRTALLAALLGEDIAGEDAAAGSTVEIPLSEITGTELQEPTA
VDVGWVELTGANERIVFSPNQQDNARAFLADLEAAQRGEDPSAGGVAGLDFVALAVSTAN
GRYGSVCQVSAARFTDGELHDDKTWLCRPPEGLDNFEDTSLAAHGITAEDVSDSPRFGEI
LGDVLEFVGSDPLLAYNAQFVATALRDAAAASAGTAAPEALFGCTLALARHSDLDLPDHR
LPTIAEGLGVEVPSPDNAPSHARAAGAVTVALAQRAGRPGSLMELFHATGLTLGEIADGK
VVSVLKDRSGAGRSLQARGVTSPAPQAAMRGEEDKATGAGTDFRAPAGAGSSATETGAGA
DDGTEQGKRGPAPWQAVATPDEIPEPSAAASPDDPLNGQNVTLTGDFEPYDKGMLWSAIA
EHGGQVAKNVTKKSTILVTGAWASKTSKEKRAEELNEKGQDIQIWSADQLYEALGLDEQP
PF
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gtgatcagcgcccatggaagcaccgtcaccgtgaccacgtcctcggtcaccgtccaccgc
acggcgctgctcgccgccctcctcggcgaggacatcgccggcgaggacgccgcggcgggc
tccaccgtggagatcccgctctcggagatcaccggcaccgagctgcaggaacccaccgct
gtcgacgtgggctgggtggagctgacgggcgcgaacgagcgcatcgtcttctcccccaac
cagcaggacaacgcccgggcgttcctcgcggatctcgaggccgcgcagcgcggcgaggat
ccctccgccggcggcgtcgccggcctcgacttcgtggccctggccgtctccacggccaac
gggcggtacggatcggtgtgccaggtgtccgccgcgcgattcaccgacggcgaacttcac
gacgacaagacctggctctgccgcccgcccgagggtctggacaacttcgaggacacctcc
ctcgccgcccacgggatcacagccgaggacgtctccgatagcccccgcttcggtgagatc
cttggcgacgtgctcgagttcgtcggctccgatccgctgctggcctacaacgcccagttc
gtggccaccgcgctgcgtgacgccgcagctgcctcggccggcacggccgcgccggaggcg
ctcttcggctgcaccctcgccctggcccgccacagcgacctcgacctgcccgaccaccgc
ctgcccaccatcgccgagggcctcggcgtggaggttccctcgcctgacaacgccccctcc
cacgcccgcgccgccggggccgtcaccgtcgcgctggcccagcgcgccggtcgcccgggc
tcgctcatggagctgttccacgccacgggcctcaccctcggcgagatcgccgacggcaag
gtcgtctcggtgctcaaggaccgctccggggccggtcggagcctgcaggccagaggcgtc
acctcacccgcgccgcaggccgcgatgcggggcgaggaggacaaggccacgggcgcgggg
accgacttccgcgcacccgccggtgcgggctcctctgccacggagactggggctggggca
gacgacggtaccgagcagggcaaacgcggcccggcgccgtggcaggccgtggccaccccg
gacgagattccggaacccagcgcggcggcctcgcccgacgatcccctcaacgggcaaaac
gtcaccctcaccggcgacttcgagccctacgacaagggcatgctgtggtcggcgatcgcc
gagcacggcggccaggtggccaagaacgtcaccaagaagtccaccatcctggtcacgggt
gcctgggcgagcaagacctcgaaggagaaacgtgccgaggagctgaacgagaagggccag
gacatccagatctggtccgccgaccagctctacgaggcgctgggactcgacgagcagcct
cctttctag
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