Cellulomonas dongxiuzhuiae: KKR89_00525 Help Entry KKR89_00525       CDS       T08574                                  Symbol hrpA Name (GenBank) ATP-dependent RNA helicase HrpA   KO K03578   ATP-dependent RNA helicase HrpA [EC:5.6.2.6] Organism cdon  Cellulomonas dongxiuzhuiae Brite KEGG Orthology (KO) [BR:cdon00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cdon03019]     KKR89_00525 (hrpA) Enzymes [BR:cdon01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      KKR89_00525 (hrpA) Messenger RNA biogenesis [BR:cdon03019]  Prokaryotic type   Bacterial mRNA degradation factors    Other RNA degradation factors     Others      KKR89_00525 (hrpA) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DUF3418 OB_NTP_bind Helicase_C HA2_C DEAD AAA_22 AAA_19 SRP54 nSTAND3 NACHT WHD_HA2 nSTAND_NTPase5 T2SSE DncV_C TsaE Zeta_toxin Motif Other DBs NCBI-ProteinID:  QWC16206 UniProt:  A0ABX8GL08 LinkDB All DBs Position complement(114989..119518) Genome browser AA seq 1509 aa AA seqDB search MSTSDPTPTDAAPAQGAGGDGARGGDGARGGDGARGGGRRRGGRSGRGGARRREDQPGDH PREDQPRDATRRRHRRDDAHLTRAAQARAQVTLPPIVYPEQLPVSARREEIAAALRDHQV IVVAGETGSGKTTQIPKIALELGRGRAGQIGHTQPRRIAARTVAERIADELGVPLGGVVG YQVRFTDESSDSTLVKVMTDGILLAQIQRDPMLRMYDTLIIDEAHERSLNIDFILGYLTR LLPQRPDLKLVITSATIDSDRFARHFAGPPTAEHPDGVPAPVVEVSGRTYPVEIRYQPLS PEDGPDRDMVTGITEAVDELMGEGPGDILVFLSGEREIRDAEDALRGSLGPRVDPKHPNG VDIVPLYARLSAAEQRRVFEAHTRRRVILATNVAETSLTVPGVRYVVDPGTARISRFSKA TKVQRLPIEPISQASANQRSGRSGRVAPGIAIRLYSQEDFESRPLYTEPEILRTSLASVI LQMIAVGVVTSPDEVVDFPFVDPPDVRSVRDGVALLTELHALEEVHGRARLTETGRALAQ LPIDPRLARMVVEAGRRGVAREVLVIAAALSIQDPRERPAESREAADALHRRFADPSSDL LSYLNLWTYLRERQRELSGSAFRRMCKAEHLHHLRVREWQDVVTQLREMAKGLGVDAKGA PTPTSSDAPAADGHGRDGRRDGGRHVPTGAPTQDATAGTAPDAVQTRWTWDGDAIHRAIL PGLLSQIGMQIVTDVAAGNPPKGRDGKPRKPDARARNEYLGARGARFAIFPGSGLARRPP SWVMAAELVETSRLWARDVARVDPDWVEEAAAHLVKRTYSEPAWSTRQGAATVNEKVLLF GVPVVAQRRSLLAKVDPEQARELFIRHALVQGEWTTHHTFFHENRRLLDEAEALEARARR RDLVVDDDALFDFYDARIPPEVVSARHFDTWWKSAKRADPDLLSFTRELLVGDDAAEIDE SAFPSRWPQGELSFPLTYQFEPGTEADGVTVHIPISQLPRVRPEGFDWMVPGMRAELLTA TIRALPKPVRVQLVPAPDVARAVDGWLAEHAASWADTVRAADAAPSFREMFARAVRALRD VEMPADAVDEDRLPAHLRMTFRIVGDRGGVVDEGKDLLALQRRLADRAQDAVASAVRTAV RAAMEEAATQAGLPTQPAPTPPAPLEATSPQGTSPQGAREQSGSAGAPRRGTPTPGARER SDATPDLERTGLTTWPDLPGPLPDVIEAVTSAGGVVRAYPTLVEEGTGPRATVALRVLAD GAVAQAAARRGLRRLLLLDAGLATPRVTSRWSGRQALALAASPYPTTDALVTDVQLAAID RLMARHLQGRTPRDVRDADAYAALRGAVRDALEDDVHRVVGDLVGVLTAWRELDGDVRGT SSLALLATAQDVREQAATLVHDGFVADVGADRLPQLVRYLRAAQHRLAKAADNPTRDADL AWQVHDVEQLYTAARERAATASPDPARDAALDDVRWLLEELRVSLFAQQLGTPVPVSPTR IRKALAALG NT seq 4530 nt NT seq  +upstreamnt  +downstreamnt gtgagcacgtccgaccccacccccaccgacgccgcacccgcccagggtgccggtggtgac ggtgcgcgcggcggtgacggtgcgcgcggcggtgacggtgcgcgcggcgggggccggcgc cgcggcggacggtccgggcgaggcggggcgcgacgacgagaggaccagccgggggaccac ccgcgcgaggaccagccacgtgacgccacccgtcgccgtcaccgccgcgacgacgcccac ctgacccgcgccgcgcaggcccgcgcgcaggtcaccctccccccgatcgtctaccccgag cagctccccgtctccgcccgccgcgaggagatcgccgcggcgttgcgcgaccaccaggtg atcgtcgtcgcgggcgagaccgggtccggcaagacgacgcagatcccgaagatcgccctc gagctgggccgtgggcgcgctggccagatcggccacacgcagccccgccggatcgcggcg cgcacggtcgccgagcgcatcgcggacgagctgggcgtgcccctcggcggcgtcgtcggg taccaggtgcggttcaccgacgagtcgtccgactcgaccctggtcaaggtgatgaccgac ggcatcctgctggcgcagatccagcgcgacccgatgctgcggatgtacgacacgctcatc atcgacgaggcgcacgagcgcagcctcaacatcgacttcatcctcgggtacctcacgcgg ctgctgccgcagcggccggacctcaagctcgtcatcacgtcggcgacgatcgactcggac cggttcgcgcggcacttcgccggcccgcccaccgcggagcaccccgacggcgtcccggcc ccggtcgtcgaggtcagcggccgcacctacccggtcgagatccgctaccagccgctgtcc cccgaggacggcccggaccgcgacatggtcaccggcatcaccgaggccgtcgacgagctc atgggcgaggggccgggcgacatcctcgtgttcctgtccggcgaacgggagatccgtgac gcggaggacgcgctgcgcgggtcgctcgggccgcgcgtggacccgaagcacccgaacggc gtcgacatcgtgccgctgtacgcgcggctgtcggccgccgagcagcgccgcgtcttcgag gcgcacacccgccgccgcgtcatcctcgcgaccaacgtcgccgagacgtcgctgacggtg ccgggcgtgcggtacgtcgtcgaccccggcaccgcgcggatctcgcggttctccaaggcg acgaaggtgcagcgcctgccgatcgagccgatctcgcaggcgtcggccaaccagcggtcg ggccggtcggggcgcgtggccccgggcatcgcgatccggctgtactcgcaggaggacttc gagtcccggccgctgtacaccgagccggagatcctgcggacgtcgctcgcgtcggtgatc ctgcagatgatcgcggtcggcgtcgtgacgtccccggacgaggtcgtggacttcccgttc gtcgacccgccggacgtgcgctcggtgcgcgacggcgtcgcgctgctcaccgagctccac gcgctcgaggaggtgcacggccgcgcgcgcctgaccgagaccggacgggcgctggcgcag ctgccgatcgacccgcgcctcgcgcgcatggtcgtcgaggcgggccgtcgcggtgtcgcg cgcgaggtgctcgtcatcgccgccgcgctgtccatccaggacccgcgcgagcggccggcc gagtcgcgcgaggcggccgacgcgctgcaccggcggttcgccgacccgtcgtcggacctg ctgtcctacctcaacctgtggacgtacctgcgcgagcggcagcgcgagctgtccgggtcc gcgttccggcgcatgtgcaaggccgagcacctgcaccacctgcgcgtgcgcgagtggcag gacgtcgtcacgcagctgcgcgagatggccaagggcctcggcgtcgacgccaagggcgca cccacgcccacgtcgtccgacgcccccgcggccgacgggcacgggcgcgacggccggcgc gacggcgggcggcacgtccccaccggcgcgccgacgcaggacgcgaccgccggcaccgcc ccggacgccgtccagacgcgctggacgtgggacggcgacgcgatccaccgcgcgatcctg cccggcctgctctcgcagatcggcatgcagatcgtcaccgacgtcgccgccggcaacccg cccaagggccgcgacggcaagccccgcaagcccgacgcgcgcgcccgcaacgagtacctg ggggcgcgcggcgcgcgcttcgcgatcttccccgggtcgggcctggcccgccgcccgccg tcgtgggtcatggccgccgagctcgtcgagacgtcccggctgtgggcgcgcgacgtcgcg cgcgtcgaccccgactgggtcgaggaggccgccgcgcacctcgtgaagcgcacctactcc gagcccgcgtggtcgacgcggcagggcgcggcgacggtcaacgagaaggtgctgctcttc ggcgtgcccgtcgtggcgcagcgccggtcgctgctggccaaggtcgaccccgagcaggcg cgcgagctgttcatccggcacgcgctggtgcagggcgagtggacgacgcaccacacgttc tttcacgagaaccgccgcctgctcgacgaggccgaggcgctcgaggcccgcgcgcgccgc cgcgacctcgtcgtcgacgacgacgcgctgttcgacttctacgacgcacgcatcccgccc gaggtcgtgtccgcacgccacttcgacacctggtggaagtccgcgaagcgtgccgacccg gacctgctgtcgttcacgcgcgagctcctggtgggcgacgacgcggccgagatcgacgag agcgcgttcccgtcgcgctggccgcagggcgagctgtcgttcccgctgacctaccagttc gagcccggcaccgaggccgacggcgtcacggtccacatcccgatctcccagctgccgcgc gtgcggcccgagggcttcgactggatggtcccgggcatgcgcgccgagctgctgaccgcg acgatccgcgccctgcccaagcccgtgcgggtgcagctcgtgccggcaccggacgtcgcc cgcgccgtggacgggtggctcgccgagcacgcggcgtcgtgggccgacaccgtgcgcgcc gccgacgcggcgccgtcgttccgcgagatgttcgcgcgcgccgtccgggcgctgcgcgac gtcgagatgcccgccgacgccgtcgacgaggaccgcctgcctgcgcacctgcgcatgacg ttccgcatcgtcggggaccgtggcggcgtcgtcgacgagggcaaggacctgctcgcgctg cagcgccggctcgcggaccgcgcgcaggacgcggtcgcgtccgccgtgcgcacggccgtg cgcgccgccatggaggaggcggccacccaggccggcctccccacccagcccgctcccacc ccaccagcccccctcgaggccacctccccccagggcacctccccccagggcgcgagagag cagtccggctccgccggcgccccccgcaggggcacccccaccccgggcgcgagagagcga tcggacgcgacccccgacctcgagcgcaccggactgacgacctggccggacctgcccggt ccgctgcccgacgtgatcgaggcggtgacctccgcgggcggcgtcgtgcgcgcctacccg accctcgtcgaggagggcacggggccccgcgcgaccgtcgccctgcgtgtgctcgccgac ggtgccgtggcgcaggccgccgcccggcgcggcctgcggcgcctgctgctgctcgacgcg ggcctcgccaccccgcgcgtgacgagccggtggagcggcaggcaggcgctcgccctggct gcgtcgccgtaccccaccacggacgccctcgtcaccgacgtgcagctcgcggccatcgac cggctcatggcccgccacctgcagggacgcacgccgcgcgacgtccgcgacgccgacgcg tacgccgccctgcgcggcgcggtgcgcgacgccctcgaggacgacgtgcaccgcgtcgtc ggggacctcgtcggtgtcctgacggcgtggcgcgagctcgacggcgacgtgcgcgggacc agcagcctcgcgctgctggccacggcgcaggacgtccgcgagcaggccgcgacgctcgtg cacgacgggttcgtggcggacgtcggcgcggaccggctgccgcagctggtccgctacctg cgcgcggcgcagcaccggctggccaaggcggcggacaacccgacccgcgacgcggacctc gcgtggcaggtgcacgacgtcgagcagctctacaccgcggcccgcgagcgcgccgcgacc gcgtcgcccgacccggcccgcgacgccgcgctcgacgacgtccgctggctgctggaggag ctgcgcgtcagcctgttcgcgcagcagctgggcacgccggtgccggtgtcgccgacgcgg atccgcaaggcgctggcggcgctcggctga

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