Cellulomonas dongxiuzhuiae: KKR89_02275
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Entry
KKR89_02275 CDS
T08574
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
cdon
Cellulomonas dongxiuzhuiae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
DUF11
zf-HC2
Sigma70_r4_2
DCR
Motif
Other DBs
NCBI-ProteinID:
QWC16520
LinkDB
All DBs
Position
476559..480602
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AA seq
1347 aa
AA seq
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MATDGSGSGVIEDDAALLRATREGETAAFGRLYERHAGAALVVARQYTHSAADAEDVVSD
AFANVHRALRGGGGPESAFRAYLFTVVRRVAAVHRTAGRRTEPTDDVAVLETASTPVETA
EAPTLAGFERSVVARAFRSLPERWREVLWHSEVEGLTPAQIAPIVGLTANSTAALAYRAR
EGLRQAYLQQHLQDPLDDGCRAVAGKLGAHVRGGLGARDTRQVEQHLDDCGECRALVLEL
GDVNHGMRAVVAPLVLGLLGLGALAHELPVGGGLAAGAAALTHQGGVAASGGVGGASGGA
GAAGGAAAGTGTAASGAVASGAAASSAAASGAAASSAVAGGAAASSAAAGGAAGVATGAA
GVLAGLSAGAVAVAVAAVVVAVAVVVGAVQLLSGPDGVVAEPRPDVSGASETAAAAPSAS
PTAASAPSTSPTTAPEQDEAAADDDAAATADEAVPGQVRPTAAATRAPAVAGAPSAAPAG
PPAPGGTPAPDAPGAPGTDPTTAPTPAPTTPPPPGPADVVVTAPGGGIALTAGVAGQAIT
LTVGNAGGLPAAALVADVALPSGVTLVAGELAAGGFGFSPADAAAWSCVTGGAGGDATCT
LQELAPGQEAVLALQVAVDESYLASGDEAVRVRISGDGAVWEPAPIRIAVAPSPPRLAFG
ERPPTDVQLVTGRSHLVEVPVRNAGGTAVSAGAPAVVEVGLPPGVSATGAAPWSCTSAEG
SIACRHGTLAPFERATLGLTLSSSSTAATGAGSVQVRLTPSAHRPVETYDVAYRLVRPAI
LTTTVPATLDVAPGTPAELAVTVGNEGDLTASGTTLTLTAPRGAAVAAGGGDGWACGGDD
ATRTCTADLAAGARSALTAAVTVPVGTVGTVGAVTVTVAGPGADVPVASRPVAVTSVEPV
LTVTEAAAVVDGYRGGTLAFAVGVAGKRDDGRPAAAATGVLATVTLPPGVTVDRTGAGPR
TAGCTDSGRFVACALGELPAGGFVPVEVPIRAAGAVLGTVDVRVTATGAQAASTSTKVVV
PSANLTPVWTGAGDLDVVEVGAPLLLCADARGGVCPSVHRESDNNGLDMRPLDQAPPPGA
RARVPVSSQTLLDLPADRPVVWAGLYWSGVRGTYDPWSGPLDTARLRTPDGTWTPVTADA
VTQVSDTNGRRYYQAAVEVTDLVARGGGGAWALADAAVSEGRSDRDPSYYAGWSLVVVHG
TPAPAGTPGASSVTVHQGGAWIGTSAAAPAFVFVGEAGARTRIGVVAWDGDRANTGDRLT
LSGVGPLTPLRWNGSAVVGGGSADNAFDSTATGWTYPNALGVDAKGFAEVTLPSGVGTLT
PTTAGDQYLIGVVTVRTAQAPLSVPVG
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
gtggccacagacgggagcgggagcggggtcatcgaggatgacgccgcgctcctgcgcgcc
acccgggagggtgagaccgccgccttcggccgcctctacgagcggcacgccggcgcggcg
ctcgtggtggctcggcagtacacccactcggccgccgacgccgaggacgtcgtctccgac
gcgttcgccaacgtgcaccgcgcgctgcggggcggtggcggacccgagagcgcgttccgt
gcctacctcttcaccgtcgtgcgccgggtcgccgcggtgcaccgcaccgccggacgccgc
accgagccgaccgacgacgtcgccgtgctcgagaccgcctcgacgccggtcgagacggcg
gaggcacccaccctcgccgggttcgagcgcagcgtcgtcgcccgggcgttccgctccctg
ccggagcgctggcgcgaggtcctgtggcacagcgaggtcgaggggctgacgcccgcccag
atcgcgccgatcgtgggtctcaccgccaacagcacggcggccctcgcctaccgcgcgcgc
gagggcctgcgtcaggcctacctgcagcagcacctgcaggacccgctggacgacggctgc
cgcgccgttgccggcaagctgggcgcgcacgtgcgcggcgggctcggcgcccgggacacg
cggcaggtcgagcagcacctcgacgactgcggggagtgccgggccctggtcctggagctg
ggcgacgtcaaccacggcatgcgggccgtcgtggcgcccctggtcctggggctgctgggc
ctcggggcgctggcccatgagctgccggtcggcggcggcctcgccgcgggcgccgccgcg
ctcacgcaccagggcggcgtcgcggcgtcgggcggggtgggtggtgcgtcaggtggggcg
ggcgccgcgggtggcgcggccgccggtacgggcacggcggcgagcggtgcggtagcgagc
ggtgcggctgcgagcagtgcggcggccagcggtgcggctgcgagcagcgcggtggcgggc
ggtgcggctgcgagcagcgcggcggcgggcggtgcggcgggggtcgcgaccggtgccgcc
ggggtgctcgccggtctctccgctggtgcggtcgcggtcgccgtcgcggcggtcgtggtc
gccgtcgcggtggtggtcggcgccgtgcagctgctgtcgggacccgacggcgtggtcgcc
gagccccggcccgacgtgtccggcgcctcggagaccgccgcggcggcgccgtcggcgtcc
ccgaccgcggcgagcgcgccgtcgacgtccccgacgaccgccccggagcaggacgaggcg
gccgccgacgacgacgccgccgcgaccgccgacgaggccgtgccgggccaggtgcgcccc
acggccgccgccacgcgtgcaccggcggtggccggcgcaccgagcgcggcaccggccgga
ccgcccgcaccgggcggaacgccggcaccggacgcgccgggtgcgccgggcaccgacccg
acgaccgcgccgacgccggcgccgaccaccccacccccgccgggaccggccgacgtcgtc
gtcaccgcgcccgggggtggcatcgccctcaccgccggggtcgccggacaggcgatcacc
ctcacggtcggcaacgccggcgggctgccggccgccgccctggtcgccgacgtcgccctg
ccgtccggcgtcacgctcgtcgccggcgagctggcggccgggggcttcggcttctcgccc
gcggacgccgccgcgtggtcgtgcgtcacgggcggcgccggcggcgacgccacgtgcacg
ctgcaggagctggcgcccgggcaggaggcggtgctcgcgctgcaggtcgcggtcgacgag
tcgtacctcgcgtccggtgacgaggccgtgcgggtgcggatctccggcgacggcgccgtc
tgggagccggcacccatccggatcgccgtcgcgccgtcgcccccacgcctggccttcggg
gagcggccgccgaccgacgtgcagctcgtcaccgggcgcagccacctcgtcgaggtgccc
gtgcgcaacgcgggcggcaccgccgtgagcgccggtgcacccgccgtcgtcgaggtgggg
ctgccgcccggcgtgtccgccacgggggccgcgccgtggtcgtgcaccagcgccgagggg
tcgatcgcgtgccggcacggcacgctggctcccttcgagcgcgcgacgctcggcctcacg
ctgagcagctcgagcaccgccgcgaccggcgcgggctcggtgcaggtccggctcacgccg
tccgcgcaccggcccgtcgagacgtacgacgtcgcctaccgcctggtgcgccccgccatc
ctgacgacgactgtccccgcgacgctcgacgtcgcgcccggcaccccggccgagctggcg
gtcacggtcggcaacgagggcgacctgaccgcgagcggcacgacgctgaccctgacggcg
ccgcgcggcgccgcggtcgctgccggtggcggtgacggctgggcctgcgggggtgacgac
gccacccggacctgcacggccgacctcgccgcgggtgcgcgcagcgcgctgacggccgcg
gtgacggtgccggtcgggaccgtcgggaccgtcggtgccgtcacggtcaccgtcgcgggc
ccgggcgccgacgtgcccgtcgcgtcccgtcccgtcgccgtgacgtccgtcgagccggtg
ctcaccgtcacggaggccgccgcggtcgtcgacggctaccgcggcggcacgctcgcgttc
gccgtgggggtcgcggggaagcgggacgacggccggcccgccgcggccgccaccggcgtc
ctggccaccgtcacgctgccgccgggcgtcacggtcgaccggaccggcgcggggccgcgg
acagccgggtgcaccgacagcggcaggttcgtggcctgcgccctcggtgagctgcccgcc
ggcgggttcgtcccggtggaggtgccgatccgcgccgcgggggccgtgctgggcaccgtc
gacgtccgcgtgacggccaccggcgcgcaggcggcgtcgacctcgaccaaggtcgtcgtg
ccgtccgcgaacctcacgcccgtgtggacgggcgccggggacctcgacgtcgtcgaggtc
ggggcgcccctcctgctgtgcgccgacgcacgcggcggtgtgtgcccctccgtgcaccgc
gagagcgacaacaacggcctcgacatgcgtcccctcgaccaggcgccgcctcccggtgcg
cgggcccgcgtgccggtgtcctcgcagacgctcctcgacctgcccgccgaccggcccgtc
gtgtgggccggcctgtactggtccggcgtgcgggggacctacgacccctggagcggtccg
ctcgacaccgcgcggctccgcacgcccgacgggacgtggacccccgtcaccgccgacgcc
gtcacgcaggtgtcggacaccaacgggcggcggtactaccaggcggccgtggaggtcacg
gacctcgtggcgcgcggcggcggcggcgcctgggcgctggccgacgctgccgtcagcgaa
gggcgcagcgaccgcgacccgagctactacgccgggtggtcgctggtggtggtgcacggg
acgcccgccccggcgggcacccccggcgcgtcgtcggtgaccgtgcaccagggcggcgcc
tggatcggcacgtccgctgcggcacccgcgttcgtcttcgtcggcgaggcgggcgcccgc
acgcgcatcggcgtcgtcgcgtgggacggggaccgcgccaacacgggcgaccggctgacc
ctctcgggcgtcggcccgctgacgccgctgcgctggaacgggtcggccgtcgtgggcggc
gggtcggccgacaacgcgttcgactccaccgcgaccggctggacctaccccaacgcgctc
ggcgtcgacgccaagggcttcgcggaggtcacgctgccgtcaggggtcgggacgctgacg
cccaccacggccggcgaccagtacctcatcggtgtcgtgaccgtgcgcacggcgcaggcg
ccgctctccgtcccggtgggctga
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