Cellulomonas dongxiuzhuiae: KKR89_07540
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Entry
KKR89_07540 CDS
T08574
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cdon
Cellulomonas dongxiuzhuiae
Pathway
cdon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KKR89_07540 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdon03019
]
KKR89_07540 (rny)
Messenger RNA biogenesis [BR:
cdon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KKR89_07540 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
HDOD
Motif
Other DBs
NCBI-ProteinID:
QWC17413
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Position
1679017..1680549
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AA seq
510 aa
AA seq
DB search
MEPGAIVTVVGLLGACLVALILVLTARREADLHRRGASEDVAQIRDDARAMLADAERRER
RVADRERELANERGELTALERRTRAEAEALAESRRSAARELDKAERAAARTLADADRAAN
ERLAEAREKARAELESVSGLTHDDALAELTRRITDQAVDAAAAQVRRTEAQARRTAEARA
RRIVSTAVQRVAVATSAQPVVAILPLPSDEMKGRIIGKEGRNIRHFEALTGVNVLVDETP
DTVVLSCFDAERREVAQVALEALMADGRIHPQRIEAAYAEALAGADDRHVAAGHDATERA
GIDHLHSELVRTMGRLRLRSSYGQNVLEHLVESAQIAAAIAAEVGADVAVARRGAFLHDL
GKALTAEVPGTHAAVGADLARRLGESDAVVNAIAAHHDEVPPATVEAVLVQAADAISASR
PGARRQEIDQYVERMGELEALVAAHDGVRRALAMAAGREVRVVVEPDEVDDRALPQLASS
IAKHIEADLTYPGEIRVTVVRELRASATAG
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
gtggaaccgggtgcgatcgtcaccgtcgtggggttgctgggcgcgtgcctcgtcgcactc
atcctcgtgctcacggcccgccgcgaggcggacctgcaccgccgtggggcatcggaggac
gtcgcgcagatccgcgacgacgcccgcgcgatgctggcggacgcggaacggcgcgaacgg
cgggtggcggaccgggagcgcgagctggcgaacgagcgtggtgagctgaccgccctggag
cggcggacgcgcgccgaggccgaggcgctcgccgagagccgccgcagcgccgcccgcgag
ctcgacaaggccgagcgggccgcggcccgtacgctcgccgacgccgaccgcgccgccaac
gagcggctcgccgaagcccgcgagaaggcccgggccgagctcgagtccgtcagcggcctc
acgcacgacgacgccctggccgagctgacgcgacgcatcaccgaccaggccgtcgacgcg
gccgccgcccaggtccggcggaccgaggcgcaggcgcgacggacggcagaggcgcgagcc
cggcgcatcgtgtcgaccgcggtgcagcgcgtggcggtcgcgacgagcgcgcagccggtc
gtggcgatcctcccgctgccgtccgacgagatgaagggccggatcatcggcaaggagggc
cgcaacatccggcacttcgaggcgctcacgggcgtcaacgtcctcgtcgacgagaccccc
gacacggtggtgctctcctgcttcgacgccgagcgccgggaggtggcccaggtggcgctc
gaggcgctcatggccgacgggcgcatccacccgcagcgcatcgaggccgcctacgcggag
gccctcgcgggggccgacgaccggcacgtggccgcggggcacgacgccaccgagcgggcc
gggatcgaccacctgcacagcgagctcgtccgcacgatgggtcggctccggctgcggtcc
tcctacgggcagaacgtcctggagcacctcgtggagagcgcgcagatagcggccgcgatc
gccgccgaggtgggtgcggacgtggcggtcgcgcgccgcggcgcgttcctgcacgacctg
ggcaaggccctcacggccgaggtgcccggcacgcacgccgccgtcggcgccgacctcgcg
cgccgcctgggcgagtcggacgccgtcgtcaacgccatcgccgcgcaccacgacgaggtc
ccgccggcgaccgtcgaggcggtcctcgtgcaggcggcggacgcgatctcggcgtcacgg
ccgggtgcccgccgtcaggagatcgaccagtacgtcgagcggatgggtgagctcgaggcc
ctcgtcgcagcgcacgacggggtgcgtcgcgccctggcgatggccgcgggccgtgaggtg
cgtgtcgtcgtcgagcccgacgaggtggacgaccgcgcgctgccgcagctcgcgtcgtcc
atcgccaagcacatcgaggccgacctgacgtaccccggcgagatccgcgtcaccgtggtc
cgcgagctgcgggcgagcgcgaccgccggctga
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