Cellulomonas dongxiuzhuiae: KKR89_07940
Help
Entry
KKR89_07940 CDS
T08574
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
cdon
Cellulomonas dongxiuzhuiae
Brite
KEGG Orthology (KO) [BR:
cdon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdon03016
]
KKR89_07940 (thpR)
Enzymes [BR:
cdon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
KKR89_07940 (thpR)
Transfer RNA biogenesis [BR:
cdon03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
KKR89_07940 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
DNA_binding_1
Motif
Other DBs
NCBI-ProteinID:
QWC17484
LinkDB
All DBs
Position
1763520..1764182
Genome browser
AA seq
220 aa
AA seq
DB search
MRLFAAVWPPDDVLDHLDLALAVVRRGSPSQDDGVRWSARETWHLTAAFYGTLPDAVTDA
LGADLAQVAAEAEPFDLQLRGAGVFAHRTLWVGTGGDVATMAGLATAARAVGEAHGAPSD
PRVRHRPHLTVGRARPGARPPRRGSRATASGGRAGGPGPGRTPGGDPRELDPAEVFEQAL
AVYEGPTWRVDALALVASRPGEGRGGGPLYATVATFALGR
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgttcgccgcggtgtggccccccgacgacgtgctcgaccacctcgacctcgcg
ctcgccgtcgtgcggcgcggctcaccgtcgcaggacgacggcgtgcgctggtccgcgcgg
gagacctggcacctcaccgcggcgttctacgggaccctccccgacgccgtgaccgacgcc
ctcggcgccgacctggcgcaggtcgcggcggaggcggagcccttcgacctgcagctgcgc
ggtgcgggcgtcttcgcgcaccgcaccctgtgggtcgggacgggcggcgacgtcgcgacg
atggcaggactggcgaccgcggcgcgggccgtcggcgaggcgcacggggccccgtcggac
ccgcgggtgcggcaccggccccacctcacggtgggccgtgcacggccgggcgcgcggcca
ccgcggcgcggctcgcgcgcgaccgcgtccggcggccgggcgggtgggcccggaccgggc
cggacgcccgggggcgacccgcgggagctcgaccccgccgaggtcttcgagcaggcgctc
gcggtctacgaggggccgacgtggcgcgtggacgccctggccctggtcgcgtcccgtccc
ggggaggggcgaggcggcggtccgctgtacgcgaccgtcgcgacgttcgccctcggacgg
tga
DBGET
integrated database retrieval system
