Cellulomonas dongxiuzhuiae: KKR89_09360
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Entry
KKR89_09360 CDS
T08574
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cdon
Cellulomonas dongxiuzhuiae
Pathway
cdon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KKR89_09360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdon03019
]
KKR89_09360
03009 Ribosome biogenesis [BR:
cdon03009
]
KKR89_09360
Enzymes [BR:
cdon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KKR89_09360
Messenger RNA biogenesis [BR:
cdon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KKR89_09360
Ribosome biogenesis [BR:
cdon03009
]
Prokaryotic type
rRNA helicases
KKR89_09360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Ser_hydrolase
Pas_Saposin
CMS1
Motif
Other DBs
NCBI-ProteinID:
QWC14601
LinkDB
All DBs
Position
2075542..2077302
Genome browser
AA seq
586 aa
AA seq
DB search
MSTPMPAALPTTTPAPATSFADLGIEPRILTAVERLGFTAPTPVQEQTIPALLAGRDVVG
VAQTGTGKTAAFGLPILQSIDPAIAAVQVIVLTPTRELAMQVADAITTFAADMPGLQVVP
VYGGSPFVPQQRALARGAQVVVGTPGRVIDHIERRTLRLEDVRFLVLDEADEMLRMGFAE
DVDKVLSGTPAGRQVALFSATMPTQIRRVADKHLVNPVSVAVTRQSSTVDSVRQTFAVVP
YRHKAGALARVLAVSDADAAIVFVRTREAAEEIGNALVQRGIAATHISGDVAQSDRERIV
ERLRSGALDVLVATDVAARGLDVERIGLVVNLDLPREPEAYVHRIGRTGRAGRSGEALTF
VTPSERPRLRQIERTTRTPLIEITIPTPAQVSAHRAAALLTRTAARMEAGRLDVVGEAVR
EHLAAHPELDPLDLLTAVTALAVGDEGPAAAAELEDLDDAVRRAREARADDTRGGAVAGN
RRRPGTTGPSGRGRYRVSVGERDGLQPGALVGALTGEGGLTGKDVGKIDIFGSFALVDIP
DGLTPEVVDRLGRTRVAGRPLRIRLDTGPQATRGPSRGERVHRAHA
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccccatgcctgctgccctgcccacgacgaccccggcccccgcgacgagcttc
gcggacctgggcatcgagccccggatcctcaccgcggtcgagcggctgggcttcacggcc
ccgacgccggtccaggagcagacgatccccgcgctgctcgcgggccgtgacgtcgtcggt
gtcgcccagacgggcaccggcaagacggccgccttcgggctgccgatcctccagtcgatc
gaccccgccatcgccgcggtgcaggtcatcgtgctcaccccgacgcgcgagctcgcgatg
caggtcgccgacgccatcacgacgttcgccgccgacatgcccggcctgcaggtcgtcccg
gtctacggcggctccccgttcgtcccgcagcagcgggcgctggcgcgcggcgcacaggtc
gtcgtcggcacccccgggcgcgtcatcgaccacatcgagcgccgcacgctgcgcctcgag
gacgtccgcttcctcgtcctcgacgaggccgacgagatgctgcggatgggcttcgccgag
gacgtcgacaaggtcctgtccggcacgccggccggccgtcaggtcgccctcttctccgcg
accatgccgacccagatccgccgcgtcgccgacaagcacctggtgaaccccgtgtcggtc
gccgtcacgcgccagtcctccacggtcgactccgtgcgccagacgttcgccgtcgtgccc
taccgccacaaggcgggcgcgctcgcccgcgtgctcgcggtcagcgacgccgatgcggcc
atcgtcttcgtgcgcacccgcgaggcggccgaggagatcggcaacgccctcgtgcagcgc
ggcatcgccgcgacccacatcagcggtgacgtcgcccagtccgaccgcgagcggatcgtc
gagcgcctgcgctccggcgccctggacgtgctggtcgcgaccgacgtcgccgcccgcggc
ctcgacgtcgagcgcatcggcctggtcgtcaacctcgacctgccgcgcgagcccgaggcc
tacgtgcaccgcatcggccgcaccggtcgcgcggggcggtccggcgaggcgctgacgttc
gtcacgccgagcgagcgtccccgcctgcgccagatcgagcgcaccacccgcacgccgctc
atcgagatcaccatcccgacgcccgcgcaggtcagcgcccaccgtgcggccgcgctgctg
acgcgcaccgcggcgcgcatggaggccggccgtctcgacgtggtcggcgaggccgtgcgc
gagcacctcgccgcgcaccccgagctcgacccgctggacctgctcaccgccgtcaccgcg
ctcgctgtcggcgacgaggggccggccgcggcagccgagctcgaggacctcgacgacgcg
gtgcgccgcgcccgcgaggcccgcgccgacgacacccgcggtggcgcggtcgccggcaac
cgccgtcgccccggcacgacgggcccgagcggacgtgggcggtaccgcgtctccgtgggc
gagcgcgacggcctgcagccgggtgcgctcgtgggcgcgctgaccggtgagggcggcctc
accggcaaggacgtcggcaagatcgacatcttcggcagcttcgcgctcgtcgacatcccc
gacggcctgacgcccgaggtggtcgaccgcctcggacgcacgcgcgtcgcgggccgcccg
ctgcgcatccgcctcgacaccggcccgcaggccacacgcggcccgtcgcgcggtgagcgc
gtgcaccgcgcgcacgcctga
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