Corynebacterium diphtheriae 241: CD241_0948
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Entry
CD241_0948 CDS
T01687
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cdp
Corynebacterium diphtheriae 241
Pathway
cdp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CD241_0948 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdp03021
]
CD241_0948 (rho)
03019 Messenger RNA biogenesis [BR:
cdp03019
]
CD241_0948 (rho)
Transcription machinery [BR:
cdp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CD241_0948 (rho)
Messenger RNA biogenesis [BR:
cdp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CD241_0948 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEX44013
LinkDB
All DBs
Position
969102..971165
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AA seq
687 aa
AA seq
DB search
MTNTDNSAQRNLAALRLPELRKIAAEMGLKGTSALRKGDLIAAINGTSAAHPTSVAPSEE
NKADAPKKERPARRRATKHVAQDAGSEPAPVVTEVAAPAEQNPAPKQEKEAPAGESERQP
RRRRAVKTSVKTTQEEPAEVRVAEATDKSSEEQSAEAGSEDKDNYHYESRSAARRARRNR
ARREQREYNRPGAKDESEASQPENENSRNDVAPESSEVADNSNEQARSDQADQSTKSDSN
DNGREDNRRGNRHERGERGDRNDRGDRNRRNRRNRRGRDRDDNRDNRENNNNEPREDEVL
QNVAGILDIVDNNVAFVRTSGYHAGAADVYVNNQMIRRLGLRSGDAIVGQVRMNGENNHG
GHNRGRNRQKYNPLVRVDSVNGMTVEEAKARPEFAKLTPLYPNQRLRLETEPKVLTTRVI
DLIMPIGKGQRALIVSPPKAGKTTILQNIANAIATNNPECYLMVVLVDERPEEVTDMQRS
VKGEVIASTFDRPPSEHTAVAELAIERAKRLVEQGQDVVVLLDSITRLGRAYNNSSPASG
RILSGGVDSNALYPPKRFLGAARNIENGGSLTIIATAMVETGSAGDTVIFEEFKGTGNAE
LKLDRKISERRVFPAVDVNPSGTRKDELLLAPEEARIMHKLRRMLSALDNQQAIDLLIKQ
LKKTKSNGEFLMQVASSAPMAADAEED
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
gtgactaatacagataacagcgcacagcgtaatctcgctgctctgcgtttgcccgaactg
cgcaaaattgccgcagaaatgggcctgaaaggtacgtccgccctgcgtaagggtgatcta
attgcggctattaacggtacctctgccgctcatccaacatctgtggccccctcggaagag
aacaaagcagatgcaccaaagaaggaacgtccagcacgtcgtcgtgcgactaagcacgtt
gcccaagatgccggttccgagccagcgccagtggtaacagaagttgctgcgcctgcagaa
cagaatcctgcgccaaaacaagaaaaagaagctccagctggtgagtccgagcgtcagcca
cgccgtcgtcgtgcagtaaagacttctgtgaaaacaacgcaggaggaacccgctgaggtt
cgcgtagcagaagctactgacaaatcttctgaagagcagtctgctgaggcaggttctgag
gataaagataactaccactacgagtctcgttctgccgctcgacgtgcccgtcgtaaccgt
gctcgtcgtgagcagcgcgaatacaatcgccctggcgctaaagatgagagcgaagcatct
cagccagaaaatgagaactctcgcaacgacgtcgcaccagaatcctctgaagtagcagac
aacagcaacgagcaagctcgttctgatcaagctgatcaatccaccaagtcggactctaac
gacaatggtcgtgaggacaaccgccgtggcaatcgacacgagcgtggggagcgtggcgat
cgtaacgatcgtggggaccgcaaccgtcgtaatcgtcgtaaccgtcgtggccgtgaccgc
gatgataaccgtgataatcgcgaaaataacaacaacgaaccacgtgaagatgaagtcttg
caaaatgttgcaggcatcttggacatcgtggacaacaatgttgctttcgtgcgtacctcc
ggttaccacgccggtgccgctgacgtctatgtgaacaaccagatgattcgccgcttggga
ttgcgttctggcgacgcaattgtgggccaagttcgtatgaatggcgaaaacaaccacggc
ggacacaaccgtggccgtaaccgccagaagtacaacccattggtacgcgttgattcagtc
aacggaatgacggtggaagaagcaaaggcacgccctgagtttgccaagctcaccccgttg
taccccaaccagcgtctgcgcctcgaaaccgagcctaaggttttgactacccgtgtgatc
gatttgatcatgccgattggtaaaggtcagcgtgctttgatcgtgtctcctcctaaggct
ggtaagaccacgatcctgcaaaatatcgcaaacgctattgctaccaacaacccagagtgc
tacctcatggttgttttggtggatgagcgtccggaagaagttaccgatatgcagcgctct
gtgaagggcgaagttattgcatcgaccttcgaccgtccaccaagtgagcacaccgctgtt
gcagagctcgctattgagcgtgcgaagcgccttgtggagcagggacaggatgttgttgtc
ctcctagactccattacgcgtcttggccgtgcctacaacaacagctcgcctgcatccggc
cgaattctctccggtggtgtggactccaatgcgttgtacccaccaaagcgtttccttggt
gcggctcgcaacatcgaaaatggtggatcgcttacgattatcgccacggccatggtcgag
actggttctgccggcgacaccgtgatcttcgaggaattcaagggcaccggtaacgccgag
ctgaagctggatcgtaagatttctgagcgccgtgtattcccagctgtcgacgtcaaccca
tcgggtacccgtaaggatgagttgctgctggctccggaagaagctcgcattatgcacaaa
ctccgccgcatgctttctgctttggataatcagcaggctatcgatttgttgatcaagcag
ctcaagaagaccaagtccaatggtgaattcttgatgcaggtagcaagttctgcgccgatg
gctgcggatgctgaggaggactaa
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