Chelatococcus daeguensis: BOQ54_00980
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Entry
BOQ54_00980 CDS
T04583
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
cdq
Chelatococcus daeguensis
Brite
KEGG Orthology (KO) [BR:
cdq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdq03032
]
BOQ54_00980
03036 Chromosome and associated proteins [BR:
cdq03036
]
BOQ54_00980
03400 DNA repair and recombination proteins [BR:
cdq03400
]
BOQ54_00980
DNA replication proteins [BR:
cdq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BOQ54_00980
Chromosome and associated proteins [BR:
cdq03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BOQ54_00980
DNA repair and recombination proteins [BR:
cdq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BOQ54_00980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_bac_1
Lmo2446-like_N
Motif
Other DBs
NCBI-ProteinID:
APF36077
UniProt:
A0AAC9JRZ1
LinkDB
All DBs
Position
221562..221891
Genome browser
AA seq
109 aa
AA seq
DB search
MIKSELVLRIAEQNPHLYQRDVENIVNAILEEITRALARGDRVELRGFGAFSVKQRNARV
GRNPRTGETVDVASKMIPVFKTGKEMRLRLNGSAAAPAAGRKAAVSVSA
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagtccgagctcgtgttgcggatcgccgagcagaatccgcacctctaccagcgc
gatgtcgagaatatcgtcaatgcgatcctcgaggagattactcgcgcgctcgcgcgaggc
gatcgggtcgagctgcgcgggttcggcgccttttcggtcaagcagcgcaatgcgcgcgtt
ggccgcaacccgcgcacgggcgagacggtcgatgttgcatcgaagatgattcccgtcttc
aagaccggcaaggagatgcgcctgcgcctcaacggcagcgccgccgccccggcggcgggc
aggaaggccgccgtgagcgtgagcgcgtga
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