Chelatococcus daeguensis: BOQ54_05155
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Entry
BOQ54_05155 CDS
T04583
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
cdq
Chelatococcus daeguensis
Pathway
cdq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cdq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BOQ54_05155
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdq02000
]
BOQ54_05155
Transporters [BR:
cdq02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BOQ54_05155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
CdiA_helical
SH3_19
Motif
Other DBs
NCBI-ProteinID:
APF36785
UniProt:
A0AAC9NY94
LinkDB
All DBs
Position
complement(1095012..1096064)
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AA seq
350 aa
AA seq
DB search
MRSVRIFALVGCLSAVVGAWGIIGAEARDLTVVSWGGNYQDAQRKIYFEPFAKQSGKPLL
DESWDGGIGVIAAKVKAGVPNWDVVQVESEELALGCADGFYEQLDWDKLGGKDKFLPAAV
SDCGVGAIVWSTALSYDADKLKEAPASWADFWDVQKFPGKRGLRRGPKYALEFALMADGV
APADVYRELATPAGVDRAFKKLDALKPHIVWWESGAQPLQLLASGEVVMTSAYNGRISGI
NKAEGKNFKVVWPGSIYAIDSWVILKNSPNKDAAMDFIAFASAPENQVKLPEYIAYGLPN
KEAAGAVPANLQADLPTAPDNLAGAIPLDADFWVDNIEELNKRFNAWLAQ
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcggtgaggatattcgcgctcgtcggctgcctgtcggccgtcgtcggcgcatgg
gggattatcggggccgaggcgcgcgacctcacggttgtgtcctggggcggcaactaccag
gacgcccagcgcaagatctatttcgagcccttcgcgaagcagagcggaaagccgctgctc
gacgagagctgggacggcggcatcggcgtcatcgccgccaaggtcaaggccggcgtgccg
aactgggacgtcgtgcaggtggaatctgaggaactcgctctcggctgtgccgacggtttc
tacgaacagcttgactgggacaaactcggcggaaaggacaagttcctgccggccgccgtg
agcgactgcggtgtcggcgccatcgtttggagcacggcgctcagctatgacgcggacaag
ctgaaggaggcgccggcctcctgggccgacttctgggacgttcagaagtttcccggcaag
cgcggcctcaggcgcgggccgaaatacgcgctcgaattcgcgctcatggcggacggcgtc
gccccggccgatgtctacagggagctcgcgacgcccgccggggtggaccgcgccttcaag
aagctcgacgccttgaagccccatatcgtgtggtgggaatcgggcgcccagccgctgcag
ctcctcgcctccggcgaggtggtgatgacgagcgcctacaacggccgcatctccggcatc
aacaaggccgagggcaagaacttcaaggtcgtctggccgggcagcatctacgccattgac
agctgggtgatcctgaagaacagccccaacaaggacgccgcaatggacttcatcgccttc
gcgagcgcgcccgagaaccaagtgaagctgcccgaatatatcgcctacggcctgcccaac
aaggaagcggccggcgccgtaccggccaatctccaggcggacctgccgaccgcgccggac
aacctcgccggggcgatcccgctcgatgccgacttctgggtggacaacatcgaggagctc
aacaagcgcttcaacgcctggctggcccagtga
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