Chelatococcus daeguensis: BOQ54_09880
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Entry
BOQ54_09880 CDS
T04583
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cdq
Chelatococcus daeguensis
Pathway
cdq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BOQ54_09880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdq03019
]
BOQ54_09880
03009 Ribosome biogenesis [BR:
cdq03009
]
BOQ54_09880
Enzymes [BR:
cdq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BOQ54_09880
Messenger RNA biogenesis [BR:
cdq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BOQ54_09880
Ribosome biogenesis [BR:
cdq03009
]
Prokaryotic type
rRNA processing factors
BOQ54_09880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Isy1
Zn_ribbon_19
Motif
Other DBs
NCBI-ProteinID:
APF37600
UniProt:
A0AAC9JRZ8
LinkDB
All DBs
Position
complement(2099347..2101752)
Genome browser
AA seq
801 aa
AA seq
DB search
MANKMLIDASHPEETRVVVVRGNRVEEFDFESANRKQLRGNIYLAKVTRVEPSLQAAFVE
YGGNRHGFLAFSEIHPDYYQIPVADRQALLAEEAQAEREAEKDEERAARRRQAKRSRKGD
DAIVSAEPGADDGAAAHDSEGAEANGEEEVIEHLGGADVGEEVPDRRHRPLRRQYKIQEV
IKRRQVLLVQVVKEERGNKGAALTTYLSLAGRYSVLMPNTARGGGISRKITNVTDRKRLK
TIAQELDVPEGMGVILRTAGASRTKAEIKRDFEYLLRMWESVRELTLKSTAPALVYEEGS
LIKRAIRDLYNKDIDEVQVSGDDGYREAKDFMRMLMPSHAKVVKPYRDPQPLFAKFGVEA
QLDAMFSNQVTLKSGGYIVINPTEALVSIDVNSGRSTREHNIEDTALKTNLEAAEEISRQ
LRLRDLAGLIVIDFIDMEEKRNNRAVEKKLKECLKNDRARIQVGRISAFGLLEMSRQRIR
TGVLESSTVVCHHCGGSGFVRATASVALHILRSIEEALLKSAAHNVVVKTRTEVALYILN
QKRVHLRELETRFDVGIAIFGDDTLSGTTNFTIERGEAVLRSEARAPATGIRIESAPAIE
EEAEVADEDEEVTEEAPQQARGPQDGTEDGNGKRRRRRRRRRGGRGGEGREAAAPAGAEP
ATALESQDDEESGSQTAGTEDPAQIVAEAAVGLPTETPAEETEESAPAKRRRTRRPARGK
RAADEAGNAAEAAVEAETESPADAVEEQAAAVPPEQPLPVVEAAPTPAPQKPAEPEPVEE
DANRPKRTGWWARAKASLTGG
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaagatgctcatcgacgcctcccacccggaagaaacccgggtggtggtcgtc
cgcggtaaccgcgtcgaagagttcgacttcgaatccgccaatcgcaagcagcttcgcggc
aatatctatctcgccaaagtcacgcgggtcgaaccgtccctgcaggccgccttcgtcgag
tacggcggcaatcgtcacggctttctcgccttcagcgagatccatcccgactattaccag
attcccgtggccgatcggcaggccttgctcgccgaggaggctcaggccgagcgcgaagcc
gaaaaggacgaggagcgcgccgcccgccgccgccaggccaagcgctcgcgcaaaggcgac
gacgcgatcgtgagcgccgagcccggggcggacgacggcgcagccgcccacgacagcgaa
ggggctgaggcgaacggcgaggaagaggtgattgagcacctcggcggcgccgacgtcggc
gaggaggtgccggaccgccggcaccgtccgctgcgtcgccagtacaagatccaggaggtg
atcaagcgccgtcaggtattgctcgttcaggtggtcaaggaagagcgcggcaacaagggc
gcggcgctaacgacctatctctcgctcgccgggcgctattctgtgctgatgcccaacacc
gcgcgcggcggcggcatctcgcgcaagatcaccaacgtcaccgaccgcaagcgcctcaag
accatcgcccaggagctcgatgtgcccgagggcatgggcgtcatcctgcgcacggcgggg
gcttcgcgcaccaaggcggagatcaagcgggacttcgaatatctgctacgcatgtgggag
agcgtgcgcgagctgacgctgaagtctaccgctccggcgcttgtctatgaggaaggctcg
ctcatcaagcgcgccatccgcgatctctacaacaaggacatcgacgaggttcaggtctcc
ggcgatgatggctatcgcgaggccaaggacttcatgcgcatgctcatgccgagccatgcc
aaggtcgtgaagccctacagggatccgcagccgcttttcgccaagttcggtgtcgaggcg
cagctcgacgcgatgttctccaaccaggtcacgctgaagtcgggcggctacatcgtcatc
aacccgacggaagcgctcgtctccatcgacgtgaactcgggccgctcgacgcgcgagcac
aacatcgaggacacggcgctcaagacgaatctggaggcggccgaggagatatcgcgccag
ttgcgcctgcgcgaccttgccggccttatcgtcatcgacttcatcgacatggaggaaaag
cgcaacaaccgcgccgtcgagaagaagctgaaggagtgcctgaagaacgaccgggctcgc
attcaggtcggccgcatatcggccttcggcctgctcgagatgtcgcgccagcgcatccgc
acgggcgtgctggaaagttccaccgtagtctgccaccactgcggcggctcgggcttcgtc
cgcgccacggcgtcggtcgcgttgcacatcctgcgctccatcgaggaggcgctgctcaag
agcgccgcgcacaacgtcgtcgtcaagacgcggactgaagttgcgctttacatcctcaat
cagaagcgcgtgcatctgcgcgagctcgaaacccgcttcgacgtcggaatcgccatcttc
ggtgacgatacgctttccggcaccacgaacttcaccatcgagcgcggcgaggccgtcctg
cgcagcgaagcgcgcgcgcctgcgacaggcatccgcatcgagagcgcgccggccatcgag
gaggaggcggaggtcgccgacgaggacgaggaggtgaccgaggaggcgccgcagcaggcc
cgcggcccgcaggatggcaccgaggacggtaacggcaaacgccgccgccgccgccgtcgc
cgtcgcggtggacgcggtggcgagggccgcgaggcggcagcgcctgccggtgccgagccg
gcgaccgcgctcgaatctcaggacgatgaggaatcgggttctcagaccgccggcaccgaa
gatcccgcgcagatcgtggccgaagcagccgtcggactgccgaccgagacacctgccgag
gagacggaggagtctgcgccggccaagcgacgccgcacgcgccgccccgcacggggcaag
cgcgcggccgacgaggccggaaacgcagcggaagctgctgtcgaggccgagacagagtct
ccggccgatgcggtagaagagcaagcggcggccgtgccgcccgagcagcccctccccgtc
gtggaagcggcacccactccggcgccgcagaagccggccgagccggagccggtggaggag
gacgccaaccggccgaagcgcacgggctggtgggcccgcgccaaggccagcctcaccggt
ggctga
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