KEGG   Chelatococcus daeguensis: BOQ54_10805
Entry
BOQ54_10805       CDS       T04583                                 
Name
(GenBank) RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
cdq  Chelatococcus daeguensis
Pathway
cdq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cdq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BOQ54_10805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdq03019]
    BOQ54_10805
Enzymes [BR:cdq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     BOQ54_10805
Messenger RNA biogenesis [BR:cdq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BOQ54_10805
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 Utp25_C Helicase_C_2 AAA_22
Other DBs
NCBI-ProteinID: APF37754
UniProt: A0AAC9JQF9
LinkDB
Position
2296858..2298393
AA seq 511 aa
MTSFSDLGLAQPLLKALESEGYEQPTPIQAQAIPHVLSGRDLLGIAQTGTGKTAAFALPI
LHRLASAPKRPGRGRCRVLVLSPTRELASQIGESFRTYGRHLNLRTAVIFGGVGHRPQSD
ALARGLDVLVATPGRLIDHMQTGAVSFAETEVVVLDEADQMLDMGFIHAIRKIVQRLPKE
RQNLFFSATMPKEIAALASDLLHDPVQVSVTPVATTAERIDQRVIFVETARKRNLLAEIL
KGEKLGRALVFTRTKHGADRVVRHLEQDGIRAAAIHGNKSQSQRERALGSFRTGETPILV
ATDIAARGIDVDGVTHVINFDLPNVPESYVHRIGRTARAGADGSAISFCDGEERAYLRAI
EKLTRQKIPATDRRANPGAEPEEPAEARPQGRNGGGRNGPGKNATGRGRHSPRGSRNTPQ
PGHHSAGKAPGHGNGHGHGSGLGQGNGQRQQDGASRRDGQRPAKAAQGSGKPQQRDHHRG
QGQGHGPAGAERMDGIGFMRPARRRGDGPSR
NT seq 1536 nt   +upstreamnt  +downstreamnt
gtgacttcattttccgatctcggcctcgcccaaccgctgctcaaggcactggagagcgag
ggttacgagcagccgacgccgatccaggcgcaggccattccccatgtcctctccggccgc
gacctgctcggcatcgcccagacgggcacgggcaagacggcggccttcgccctccccatc
cttcaccgcctcgccagcgcgccgaagcgcccgggccgtgggcgctgccgcgtgctcgtg
ctgagtccgacgcgcgagctcgccagccagatcggcgagagcttccgcacctatggtcgc
cacctcaacctgcgcaccgccgtgatcttcggcggcgtcggccaccggccgcagtccgat
gcgttggcgcgcggcctcgacgtgctggtcgcgacgcccggccggctgatcgaccacatg
cagacgggtgccgtcagctttgccgagaccgaggtcgtggtcctcgacgaggccgaccag
atgctcgacatgggcttcatccacgccatccggaagatcgtgcagcgcctgccgaaggag
cgccagaacctcttcttctcggccaccatgccgaaggagatcgccgcgcttgcgtccgac
ctgctgcacgacccggtgcaggtttcggtgacgccggtcgcgacgacggccgagcgcatc
gaccagcgcgtcatcttcgtcgagacggcgcgcaagcgtaacctcctcgccgagatcctg
aagggcgagaagctcggccgcgcgctcgtcttcacccgcaccaagcacggcgccgaccgc
gtggtgcgccacctcgaacaggacggcatccgggccgcggcgatccacggcaacaagagc
cagtcgcagcgcgagcgcgcgctcggcagcttccgcaccggcgagacgcccatccttgtt
gcgacggacatcgccgcccgcggcatcgatgtcgacggcgtgacccacgttatcaacttc
gacctgccgaacgtgccggaatcctacgtgcatcgcatcggccgcacggcccgcgccggc
gccgacggcagcgccatctccttctgtgacggtgaggagcgcgcctatctccgggccatc
gagaagctgacgcgccagaagatcccggcaaccgaccggcgcgccaatccgggcgccgag
ccggaggagcccgccgaagcccgcccacagggccgcaacggcggcggcaggaacggcccc
ggcaagaacgccactggcaggggccggcactctccgcgcggcagccgcaacacgccgcag
ccgggccaccacagtgccggcaaggcgccgggtcacggcaacggccatggtcacggcagc
ggcctcggccagggcaacggccagcgccagcaggacggtgcgtcccgccgtgatggccag
cggccggccaaggccgcgcagggcagcggcaagccgcagcagcgcgaccaccaccgtggt
cagggccagggtcatggcccggccggcgccgagcgcatggacggcatcggtttcatgcgc
ccggcccgccgccgcggcgacggcccgtcgcgctga

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