Chelatococcus daeguensis: BOQ54_11470
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Entry
BOQ54_11470 CDS
T04583
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cdq
Chelatococcus daeguensis
Pathway
cdq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cdq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BOQ54_11470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdq03021
]
BOQ54_11470
03400 DNA repair and recombination proteins [BR:
cdq03400
]
BOQ54_11470
Enzymes [BR:
cdq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BOQ54_11470
Transcription machinery [BR:
cdq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BOQ54_11470
DNA repair and recombination proteins [BR:
cdq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BOQ54_11470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
ApbA_C
Motif
Other DBs
NCBI-ProteinID:
APF37878
UniProt:
A0AAC9JPP2
LinkDB
All DBs
Position
complement(2433750..2437943)
Genome browser
AA seq
1397 aa
AA seq
DB search
MNQEVMNLFNTQAPAQTFDQIKISLASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGVICEKCGVEVTLARVRRERMGHIELAAPVAHIWFLKS
LPSRIGLLLDMTLKDLERILYFEYYVVIEPGITPLKERQLLSEEEYLRAQDEYGEDSFTA
MIGAEAIREILRSLDLEKIAADLRQEIATTTSELKPKKLMKRLKIIEAFIQSGNKPEWMI
LTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIIRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG
PELKLHQCGLPKKMALELFKPFIYARLDAKGLSATVKQAKKLVEKEKPEVWDILDEVIRE
HPVMLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYLSILAEGEPGEGKVFADMGELEHALA
AKVVTLHSKIKYRWTGVAEDGSTFSRIYETTPGRVILSRVLPRHPAVPFDVVNKLMTKKE
ISNMIDTVYRNCGQKESVIFCDRIMGLGFYHAFKAGISFGKDDMVVPENKWSIVDETRAL
VKDYEQQYQDGLITQGEKYNKVVDAWAKCSDRLAGEMMARISAVQKDENGRDKPVNSIYM
MAHSGARGSPAQMKQLAAMRGLMAKPSGEIIESPIISNFKEGLDVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDAVIREPDCGTDKGIRMRAIVDAGQIVASLASRILGRTA
AEDLVDADGKVIVPAGTMIEEWHIEPITAAGIQEVKIRSVLTCEAKNGVCATCYGRDLAR
GTPVNYGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQIADQSFVESNFEGTVKIRNRNVA
RNSDGDLIAMGRNLAVLIVGPDGQERAVHRIQYGARLKVDEGDTIKRGQRIAEWDPYTRP
ILTEVDGVVGFEDLVEGASMSEQIDESTGIAKRVVIDWRGSARTSDLRPAIVIHDESGKI
AKLARGGEARSLLAVDAIIGVDPGAKVKAGDVLARIPMESAKTRDITGGLPRVAELFEAR
RPKDAAIIAEKSGTIQFGRDYKNKRRLTLVPHDGSESVEYLIPKGKHIHLQDGDVVEVGD
FIVDGNPAPHDILAIKGVEELAAYLVNEIQEVYRLQGVNINDKHIEVIVRQMLQKVEIQE
PGDSEFLQGEQVDRLEMEEANEALVAQGKKPAVGTPVLLGITKASLQTRSFISAASFQET
TRVLTEAAVNGKTDMLEGLKENVIVGSLIPAGTGAVAARLREIAQRRDELILAQKANESG
HAAAAAVGGELPPAAAE
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagaggtcatgaatctcttcaatacccaggctccggcgcagaccttcgaccag
atcaagatctcgcttgccagcccggagaagattctgtcctggtcctacggcgagatcaag
aagccggagacgatcaactaccgcacgttcaagcccgagcgtgacggcctgttctgcgcg
cggatcttcggcccgatcaaggactatgagtgcttgtgcggcaagtacaagcgcatgaag
tacaagggcgtcatctgcgagaagtgcggcgtcgaggtgacgctggcgcgcgtccggcgc
gagcgcatgggccatatcgagctcgctgcgccagtggcgcacatttggttcctgaagtcg
ctgccgtcgcgcatcggcctgctgctcgacatgacgctcaaggatctcgagcggatcctt
tatttcgagtactacgtcgtcatcgagccgggcatcacccccctcaaggagcgccagctc
ctgtcggaggaggagtatctgcgcgcgcaagacgagtatggcgaggacagcttcacggcg
atgatcggcgccgaggcgatccgcgagattctccggagcctcgacctcgagaagattgcg
gcggacctgcgccaggagattgccacgacgacctccgagctcaagccgaagaagctgatg
aagcgcctcaagatcatcgaggccttcatccagtccggcaacaagcccgagtggatgatt
ctgaccgtcgtgccggtgatcccgccggacctgcgcccgctcgtcccgctcgacggcggc
cgcttcgcaacgtcggatctcaacgatctctaccgccgcgtcatcaaccgcaacaaccgc
ctgaagcggctgatcgagctcagggcgcccgacatcatcatccgcaacgagaagcggatg
ctgcaggaggctgtcgacgcgctgttcgacaacggccggcgcggccgcgtcatcacgggt
gccaacaagcgcccgctgaagtcgctcgccgacatgctgaagggcaagcagggccgcttc
cgtcagaacctgctcggcaagcgcgtcgactattccggccgctcggtgatcgtcgtcggg
cccgagctcaagctgcatcagtgcggcctgccgaagaagatggcgctcgaactgttcaag
ccgttcatctatgcgcggcttgacgccaagggcctctcggccacggtgaagcaggcgaag
aagctcgtcgagaaggagaagcccgaggtctgggacatcctcgacgaggtgatccgcgag
catccggtgatgctcaaccgggcgcccacgttgcaccgtctcggcattcaggccttcgag
ccgaccctcatcgagggcaaggccatccagctgcacccgctcgtctgcgcggcgttcaac
gccgacttcgacggtgaccagatggccgtgcacgtgcccctctcgctggaagcccagctc
gaggcgcgtgtgctgatgatgtcgacgaacaacatcctgcacccggccaacggtcagccg
atcatcgtgccgtcgcaggatatcgttctcggcctctactatctctcgatcctcgccgag
ggcgagccgggcgagggcaaggtgttcgccgacatgggcgaactcgagcatgcgcttgcg
gccaaggttgtcaccctgcactcgaagatcaagtatcgctggacgggtgtggccgaggac
ggttctaccttctcccgaatctacgagacgacaccgggccgcgtgatcctgtcgcgcgtc
ctgccccggcacccggccgttcccttcgatgtcgtgaacaagctcatgacgaagaaggag
atctcgaacatgatcgacaccgtctaccgcaactgcgggcagaaggaatcggtcatcttc
tgcgatcgcatcatgggtctcggcttctaccatgcgttcaaggccggcatctcgttcggc
aaggacgacatggtggtgcccgagaacaagtggtcgatcgtcgacgagacgcgcgcgctc
gtgaaggactacgagcagcagtaccaggacggtctcatcacgcagggcgagaagtacaac
aaggtcgtcgacgcctgggccaagtgctcggatcgccttgccggcgagatgatggcgcgt
atctcggccgtgcagaaggacgagaatggccgcgacaagccggtgaactccatctacatg
atggcccattccggcgcccgcggctcgccggcgcagatgaagcagctcgcggccatgcgc
ggcctgatggccaagccctccggcgagatcatcgagagcccgatcatctcgaacttcaag
gaaggcctcgacgtgctcgagtacttcaactcgacgcacggcgctcgcaagggcctcgcc
gacacggcgctcaagacggcgaactcgggctatctcacccgccgtctcgtcgacgtggcg
caggatgcggtcatccgtgagcccgactgtggcaccgacaagggcatccgcatgcgggcc
atcgtcgatgccggccagatcgtggcctcgctcgcctcgcgtatcctcggccgcaccgcc
gcggaggatctcgtggatgcggacggcaaggtcatcgtgcccgccggcaccatgatcgag
gaatggcacatcgaaccgatcaccgccgccggcatccaggaggtgaagatccgctcggtg
ctgacctgcgaggccaagaacggcgtctgcgccacctgctacgggcgcgatctggcgcga
ggcacgccggtcaactacggcgaggccgtcggtgtcatcgcggcgcaatcgatcggcgag
ccgggcacgcagctcacgatgcgcacgttccacatcggcggcgccgcgcagatcgccgac
cagtcgttcgtcgagtccaacttcgagggcaccgtcaagatccgcaaccggaacgtggcg
cgcaactcggacggggatctcatcgccatgggccgcaacctcgccgtgctcatcgtcggg
ccggacgggcaggagcgggcagtgcaccgcatccaatacggtgcgcgcctcaaggtcgac
gaaggcgacaccatcaagcgtggccagcgcatcgccgagtgggatccctacacccggccg
atcctgaccgaggtcgacggtgtggtcggcttcgaggacctcgtcgagggtgcctcgatg
tcggaacagatcgacgagtcgaccggcatcgccaagcgcgtcgttatcgactggcgcggc
tcggcccgcacgtcggacctgcggcccgccatcgtcatccacgacgagagcggcaagatc
gccaagctcgcccgcggcggcgaggcccgctcgctgctcgcggtcgatgccatcatcggc
gtggatccgggcgcgaaggtcaaggccggcgacgtgcttgcccgtatcccgatggagagc
gccaagacgcgcgacatcactggcggtctgccgcgggtggccgagctgttcgaggcgcgc
cggccgaaggatgcggcgatcattgccgagaagtccggcacgatccagttcgggcgcgac
tacaagaacaagcgccgcctgacgctcgtgccgcatgacggctcggagtcggtcgagtac
ctcattccgaaaggcaagcacatccaccttcaggacggtgacgtggtggaggtcggcgac
ttcattgtcgacggcaatcccgcgccgcacgacatccttgccatcaagggcgtcgaggaa
ctggccgcctatctcgtcaacgagatccaggaagtgtatcgcctgcagggcgtgaacatc
aacgacaagcacatcgaggtgatcgttcgccagatgttgcagaaggtcgagatccaggag
cccggtgacagcgagttcctgcagggcgagcaggtcgaccgcctggaaatggaagaggcg
aacgaggcactcgtcgcccaaggcaagaagccggcggtgggcacgccggtcctgctcggc
atcaccaaggcgagccttcagacccgctcgttcatctccgccgcctccttccaggagacg
acgcgcgtccttaccgaggccgccgtcaacggcaagacggacatgctcgagggcctcaag
gagaacgtcatcgtgggcagcctcattccggccggcaccggggccgtggctgcccgcctg
cgcgagatcgcgcagcgccgcgacgaactcatcctcgcgcagaaggcgaacgaatccggc
cacgccgctgcggcggccgtgggcggggaactgccgcccgccgcggcggagtaa
DBGET
integrated database retrieval system
