Corynebacterium diphtheriae HC03: CDHC03_0645
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Entry
CDHC03_0645 CDS
T01695
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cdr
Corynebacterium diphtheriae HC03
Pathway
cdr03420
Nucleotide excision repair
cdr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CDHC03_0645
03430 Mismatch repair
CDHC03_0645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdr03400
]
CDHC03_0645
Enzymes [BR:
cdr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDHC03_0645
DNA repair and recombination proteins [BR:
cdr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDHC03_0645
MMR (mismatch excision repair)
Other MMR factors
CDHC03_0645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AEX78376
LinkDB
All DBs
Position
655678..658908
Genome browser
AA seq
1076 aa
AA seq
DB search
MLSPQELSHALGQKFPPTPQQADVISSPLAPTLVVAGAGAGKTETMAARVVWLVASGLVD
PDRVLGLTFTRKAAQQLSKRIRDRLEQLAGIDNLRDLDPTGALATKLEAIAPTVSTYDSY
AGRLISEYGLLLPVEPSSRLISQTELFQIAHSIVSAHTGALNTSNSPNTVTSTLMSLVSE
MDNHMVSPTDIEEESAAFLAMIEDVEATSKRAPSKEVYKWRDTQVLRNELLPLVQQLKTH
LADNHLMTFGEQMSLAARLAAENPQVGASQRNRYQIIMLDEYQDTGHAQRVLLKSLFAGT
AVTAVGDPMQSIYGWRGATAANLERFLTDFGNNGAPATKKELTVSFRNPPEVLDLANRVS
RELLGVPEDPRRPVQPLEPGPAALNGTVRLGFFPSMDEERSYVADHLAQAYEQHDGDHPF
TAAVLVRKRKHSAAIALELQQRGVPVEIVGLAGLLGIPEVADLVAIATLLVRPYDTQAAM
RILAGPSVGLGMADLMALSDRAYNLSGRDRRATTELSRDPLKRLKQIIADTIPSDQDSIV
GLAEAVADLDERLDSSDGPRYSAKGSERLRTLAARLRYLRTNSLSNSLPDLFADIERVFG
IRTEVLQREDPRSDGATGTAHLDRFAEVVQDFSRIPGANLSLLLDYLSLAESEENGLEPG
EVQVTADRVQILTVHKAKGLEWQHVAVLHADANTYVAKASTWLTNASAVPSALRGDAKGD
EDLVGAPVFEIDTPETAAELAKAGKAHIADFKQVAAEENARLFYVAITRAEQQVLVTASA
DPSKKRPVLPYEYLTMLRNDFPDSVEEWHERGEAEDYVPPAPQEAVFPPNYTVVGAEDVF
AAMQKQPDLISDDDLFERWEKEVSALIEEHEQLSAPVVAVDIGVELTATDIVNLAKNPEN
FAQRRRRPVPFKPNSYAKRGTAFHEWLENRFGAEALLDETELPGIGEELDDSDLDRLKEA
FLDSEWADRTPEHVEHPFEVSIGHHIVRGRMDAVFKNPDGRWIVVDWKTGQPPTDNHEKE
SVAMQLAVYRLAWARLQGIDVDRVDAAFHYVGRNVTYRPQQLPDGEELALKLDPSV
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgctaagccctcaagaactctcgcacgcactgggacaaaaatttccaccaacgccgcaa
caagcagacgttattagctcaccccttgcccccacactcgtggtcgctggagcaggtgca
ggaaaaactgaaacgatggctgcccgagtggtgtggctcgtggctagtggactcgtcgac
cctgatcgtgttttagggctcaccttcacgcgtaaagcagcacagcagttatccaagcga
attcgtgatcggcttgaacaactagcaggcattgataacctgcgcgatctagatccgaca
ggcgcattggctacaaaactagaagcgatcgcccccacggtatctacctacgactcctac
gcaggacgcctgatcagcgaatacggtttgttgcttcctgtagaaccctcgtcgcgtctt
atctcccaaacagagctattccaaattgcgcattcgatagtgtctgctcacacgggtgca
ctcaatacctcgaattcacccaataccgtgacctccacgctgatgtctttggtttcggaa
atggacaaccacatggtgtcgcccacagacattgaagaagaatcagcggcatttcttgcc
atgatcgaagacgtcgaagcaacaagtaaacgggcaccaagcaaagaggtgtacaaatgg
cgagacacacaggtgctgcgcaatgaactcctgccactagttcaacagctcaaaacacat
ctagctgacaaccacctcatgacctttggcgagcaaatgtctttagcagcccgcctcgct
gcagaaaatccacaggtgggagcgtcgcaacgcaataggtatcagatcatcatgcttgat
gaataccaagatactggccatgcgcagcgtgttttgctcaaaagcctatttgctggcacc
gcagtcaccgcagttggtgaccccatgcaatctatttacggatggcgtggtgccactgca
gccaacctcgaaaggttccttacagacttcggaaataacggtgctcccgccaccaaaaaa
gaactcaccgtgtcgtttagaaaccctcctgaggtcctcgacttagctaaccgagtatct
cgggaactgctgggcgtacccgaagatccgcgacgaccagtgcaacctctcgagccaggc
cctgcagcattaaacggcacagtgagattgggttttttcccatcgatggacgaagagcga
tcctatgttgctgatcatttagctcaagcatatgagcaacacgatggggatcatcccttt
actgcggctgtgcttgttcgcaaacgcaagcactcggcggcaattgctctggaattacaa
caacgcggcgtcccagtagaaattgttggactcgcaggactactcggtattccagaagtt
gcggatttagtagctattgccacattgttggtgcgtccttacgatactcaagccgctatg
cgtattttggcaggacccagcgtaggacttggtatggcggacctcatggctttgagcgat
cgcgcctacaacctcagtggccgagatcgacgtgccacaaccgaattatcgcgtgaccct
ctcaaacggttaaagcagatcattgccgatacaattcccagtgaccaagattctatagtg
ggtcttgcagaagcagtggctgaccttgatgaacgcctcgacagcagcgatggtccgcga
tatagcgccaaaggtagcgagcgactccgcacactagcggcacggctgcgctatctacgc
accaatagcttgagcaactcattaccggacctctttgccgatattgaacgagtattcggc
atacgcaccgaggtcctacaacgagaagatccccgtagcgatggtgcaaccggcaccgca
cacctcgaccggttcgccgaggttgtccaagatttctctcgtattccaggtgccaacttg
agtttgctattggactacctttcactggcagaatccgaagaaaatgggttagaacctggc
gaagtacaagtgactgctgaccgagtacagatccttaccgtgcataaagccaaaggccta
gaatggcaacacgttgcggttttgcatgccgacgccaacacctacgtagccaaagcgtcg
acatggctgacaaacgcttcagctgtgccttcagcacttcgcggagatgccaaaggcgac
gaggatctcgtaggcgcacccgtttttgaaatcgacaccccagaaaccgcagcggaacta
gcaaaagctggaaaagcgcatattgctgattttaaacaagtggctgcggaagaaaacgca
cgtcttttttacgtcgcaattactcgagcagaacaacaagtacttgtcacagcttctgcc
gatccctcaaaaaaacgtccagtcctgccttacgaatacctcactatgctgcgcaacgat
ttccctgacagcgtagaagaatggcatgaacgtggtgaagcagaagactatgtgccacca
gcgcctcaagaagccgtattcccaccgaactacaccgttgtcggcgcagaagacgtgttc
gccgccatgcaaaagcaaccagatctgatcagcgacgacgatctgtttgaacgatgggaa
aaagaagtaagcgctttgatcgaagaacacgagcaactttccgcacccgtcgtcgcagtc
gatatcggagtagagcttacagccacagacattgtgaaccttgcaaagaaccccgagaac
tttgctcaacgcagacggcgtccagtgccatttaaaccaaactcatacgccaagcgcggt
acggccttccacgaatggctagaaaaccgctttggtgcagaagcattacttgatgaaact
gagctgccgggtatcggagaagaacttgatgactcggacctcgatagattgaaagaggcg
ttcctagacagtgagtgggcagaccgaaccccagaacatgtagagcacccctttgaagta
tcaattgggcaccacatagttcgtgggcgcatggacgcagtgtttaaaaaccccgacgga
cgatggatcgttgtggattggaaaacgggacagcccccaacagacaatcacgaaaaagaa
tcagtggccatgcagctggcagtttatcgactcgcatgggcacgacttcaaggaattgat
gtggatcgagtcgacgcagcattccactatgtgggcagaaatgtgacataccggccacaa
caattgcctgatggggaagaacttgcattgaaactagacccaagcgtgtag
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