Corynebacterium diphtheriae HC03: CDHC03_0943
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Entry
CDHC03_0943 CDS
T01695
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cdr
Corynebacterium diphtheriae HC03
Pathway
cdr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDHC03_0943 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdr03021
]
CDHC03_0943 (rho)
03019 Messenger RNA biogenesis [BR:
cdr03019
]
CDHC03_0943 (rho)
Transcription machinery [BR:
cdr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CDHC03_0943 (rho)
Messenger RNA biogenesis [BR:
cdr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CDHC03_0943 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEX78674
LinkDB
All DBs
Position
984070..986142
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AA seq
690 aa
AA seq
DB search
MTNTDNSAQRNLAALRLPELRKIAAEMGLKGTSALRKGDLIAAINGTSAAHPTSVAPSEE
NKADAPKKERPARRRATKHVAQDAGSEPAPVVTEVAAPAEQNPAPKQEKEAPAGESERQP
RRRRAVKTSVKTTQEEPTEVRVAEAAEATDKSSEEQSAEAGSEDKDNYHYESRSAARRAR
RNRARREQREYNRPGTKDESEASQPENENSRNDVAPESSEVADNSNEQARSDQADQPTKS
DSNDNGREDNRRGNRHERGERGDRNDRGDRNRRNRRNRRGRDRDDNRDNRENNNNEPRED
EVLQNVAGILDIVDNNVAFVRTSGYHAGAADVYVNNQMIRRLGLRSGDAIVGQVRMNGEN
NHGGHNRGRNRQKYNPLVRVDSVNGMTVEEAKARPEFAKLTPLYPNQRLRLETEPKVLTT
RVIDLIMPIGKGQRALIVSPPKAGKTTILQNIANAIATNNPECYLMVVLVDERPEEVTDM
QRSVKGEVIASTFDRPPSEHTAVAELAIERAKRLVEQGQDVVVLLDSITRLGRAYNNSSP
ASGRILSGGVDSNALYPPKRFLGAARNIENGGSLTIIATAMVETGSAGDTVIFEEFKGTG
NAELKLDRKISERRVFPAVDVNPSGTRKDELLLAPEEARIMHKLRRMLSALDNQQAIDLL
IKQLKKTKSNGEFLMQVASSAPMAADAEED
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
gtgactaatacagataacagcgcacagcgtaatctcgctgctctgcgtttgcccgaactg
cgcaaaattgccgcagaaatgggcctgaaaggtacgtccgccctgcgtaagggtgatcta
attgcggctattaacggtacctctgccgctcatccaacatctgtggccccctcggaagag
aacaaagcagatgcaccaaagaaggaacgtccagcacgtcgtcgtgcgactaagcacgtt
gcccaagatgccggttccgagccagcgccagtggtaacagaagttgctgcgcctgcagaa
cagaatcctgcgccaaaacaagaaaaagaagctccagctggtgagtccgagcgtcagcca
cgccgtcgtcgtgcagtaaagacgtctgtgaaaacaacgcaggaggaacccactgaggtt
cgcgtagcagaagctgcagaagctactgacaaatcttctgaagagcagtccgctgaggca
ggttctgaggataaagataactaccactacgagtctcgttctgccgctcgacgtgcccgt
cgtaaccgtgctcgtcgtgagcagcgcgaatacaatcgccctggcactaaagatgagagc
gaagcatctcagccagaaaatgagaactctcgcaacgacgtcgcaccagaatcctcggag
gtagcagacaacagcaacgagcaagctcgttctgatcaagctgatcaacccaccaagtcg
gactctaacgacaatggtcgtgaggataaccgtcgtggcaatcgacacgagcgtggggag
cgtggcgatcgtaacgatcgtggggaccgcaaccgtcgtaatcgtcgtaaccgtcgtggc
cgtgaccgtgatgataaccgtgataatcgcgaaaataacaacaacgaaccacgtgaagat
gaagtcttgcaaaatgttgcaggcatcttggacatcgtggacaacaatgttgctttcgtg
cgtacctccggttaccacgccggtgctgctgacgtctatgtgaacaaccagatgattcgc
cgcttgggattgcgttctggcgacgcaattgtgggccaagttcgtatgaatggcgaaaac
aaccacggcggacacaaccgtggccgtaaccgccagaagtacaacccattggtacgcgtt
gattcagtcaacggaatgacggtggaagaagcaaaggcacgccctgagtttgccaagctc
accccgttgtaccccaaccagcgtctgcgcctcgaaaccgagcctaaggttttgactacc
cgtgtgatcgatttgatcatgccgattggtaaaggtcagcgtgctttgatcgtgtctcct
cctaaggctggtaagaccacgatcctgcaaaatatcgcaaacgctattgctaccaacaac
ccagagtgctacctcatggttgttttggtggatgagcgtccggaagaagttaccgatatg
cagcgttctgtgaagggcgaagttattgcatcgaccttcgaccgtccaccaagtgagcac
accgctgttgcagagctcgctattgagcgtgcgaagcgccttgtggagcagggacaggat
gttgtagtactcctagactccattacgcgtcttggccgtgcctacaacaacagctcacct
gcatccggccgaattctctccggtggtgtggactccaacgcgttgtacccaccaaagcgt
ttccttggtgcggctcgcaacatcgaaaatggtggatcgcttacgattatcgccacggcc
atggttgagactggttctgccggcgacaccgtgatcttcgaggaattcaagggcaccggt
aacgccgagctgaagctggatcgtaagatttctgagcgccgtgtattcccagctgtcgac
gtcaacccatcgggtacccgtaaggatgagttgctgctggctccggaagaagctcgcatt
atgcacaaactccgccgcatgctttctgctttggataatcagcaggctatcgatttgttg
atcaagcagctcaagaagaccaaatccaatggtgaattcttgatgcaggtagcaagttct
gcgccgatggctgcggatgctgaggaggactaa
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