Clostridium drakei: B9W14_03820
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Entry
B9W14_03820 CDS
T05484
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cdrk
Clostridium drakei
Pathway
cdrk03410
Base excision repair
cdrk03430
Mismatch repair
cdrk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdrk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B9W14_03820
03430 Mismatch repair
B9W14_03820
03440 Homologous recombination
B9W14_03820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdrk03400
]
B9W14_03820
DNA repair and recombination proteins [BR:
cdrk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
B9W14_03820
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B9W14_03820
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B9W14_03820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AWI03646
UniProt:
A0A2U8DLR7
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All DBs
Position
845992..847770
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AA seq
592 aa
AA seq
DB search
MKKKWMLKRCRGDAKDIAKSLGVSEILACILINRGVKTEDKIKKFMNPSLEYLYDPLLMK
DIDKGTNIIKNVILKKNKIVVYGDYDADGIISTYILYSALVECGAEVKYHIPDRVTEGYG
INSESIKALKEEGYDTIITCDNGISALEQIKIAKELDMTVVITDHHDIPFTEEADGNKKF
VIPEADAIINPKQEDCNYPFKSLCGAGVAFKFVQVLYSKMGIDEKKSYKFIEYAAIGTIC
DVVDLLDENRIIAKNGLDMLNETKNIGLKALIKETALDEKKINSYHIGFVIGPCINATGR
LDSATLALKLLLCNDDEEAECLAKKLHELNVQRQNMTMDSVNQIIDTIENSDMKNDKVLV
IYKKDVHESIAGIVAGRLKEKYNVPSIVITKGEKTPKGSGRSIEEYNMFHELTRCKDMLK
KFGGHPLAAGLSIEEENIDKFRSALNDNCCLTKDDITPKIRIDKQLSLNEVSFDLINEIQ
KLEPFGKSNSHPYFAEKNINVFRIYFIGKEKNIVKFFCRNTNNFEKLDAICFDGGDKFKQ
IIEESYGEKRLKEILQSNIANLKLDFIFSPEINEFKGNKSLQLVVKDFRLSM
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaaaaatggatgttaaaaaggtgtagaggagatgcaaaggatatagctaaaagt
ttaggagtaagtgaaattttagcatgcattttaataaatagaggagtaaaaactgaagac
aaaataaagaagtttatgaacccttcattggagtatttatatgatcctctacttatgaag
gatatagataagggaacaaatattataaagaatgtcatattgaaaaaaaataaaatagtg
gtatatggtgattatgatgcagatgggattataagtacatatattttatattctgctctt
gtagaatgtggagctgaagtaaaatatcacataccagatagggttacagaaggttatggt
ataaatagtgaaagtataaaagctcttaaagaagaaggatacgatactataataacttgt
gacaatggtatatcagccttggaacaaataaaaattgccaaagaacttgatatgacagtg
gtaataacagatcatcatgatataccatttacagaagaagctgatggaaataaaaaattt
gttatacctgaagcagatgccataataaatccaaaacaagaagattgcaattatcctttc
aaatcattatgtggtgctggagtagcatttaaatttgtacaagtactttatagcaaaatg
ggaatagacgaaaaaaaatcatacaaattcatagaatatgcagccattggaactatatgt
gatgtagtagacttattagatgaaaatagaattattgctaaaaatggtttggacatgttg
aacgaaactaagaatattggattaaaagcacttataaaggaaactgctttagatgaaaag
aaaataaattcatatcatatagggtttgttataggaccatgcataaatgctacaggaaga
ttagatagtgctacattggctttaaagcttcttttatgtaatgatgatgaagaagctgaa
tgtcttgcaaaaaaacttcatgaattaaatgtacagagacaaaacatgactatggatagt
gtgaatcaaattatagatactattgaaaattcagatatgaaaaatgataaagttttggtc
atttataaaaaagatgttcatgaaagtatagccggtattgttgcaggaagattgaaagaa
aaatataatgtaccatctattgtaattacaaaaggagaaaaaacgcctaaaggatcaggt
agatctattgaagaatataatatgtttcatgagcttacaagatgcaaggatatgttaaaa
aaatttggaggtcatcctttagcggcaggattgtctatagaagaagaaaatatagacaag
tttaggagcgctttaaatgataattgttgtctcacaaaagatgatataacacctaaaata
agaatagataaacaattaagtttaaatgaagttagttttgatttaataaatgaaattcaa
aaattagaaccatttggaaagagcaattctcatccttattttgcagaaaaaaatataaat
gtatttagaatatattttattggtaaagaaaaaaatatagtgaaatttttctgcagaaat
acaaataactttgagaaattagatgctatttgttttgatggtggagataagtttaaacag
atcatagaagaaagttatggggagaaaagacttaaagaaattttgcaaagcaatatagct
aatttgaaattggactttatattttcaccagaaataaatgaatttaaggggaacaagtca
ttgcaattggtggtaaaggattttaggctatctatgtga
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