Clostridium drakei: B9W14_10390
Help
Entry
B9W14_10390 CDS
T05484
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cdrk
Clostridium drakei
Pathway
cdrk03420
Nucleotide excision repair
cdrk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdrk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B9W14_10390
03430 Mismatch repair
B9W14_10390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdrk03400
]
B9W14_10390
Enzymes [BR:
cdrk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B9W14_10390
DNA repair and recombination proteins [BR:
cdrk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B9W14_10390
MMR (mismatch excision repair)
Other MMR factors
B9W14_10390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
Viral_helicase1
UvrD_C_2
AAA_30
Ras_bdg_2
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AWI04887
UniProt:
A0A2U8DQ30
LinkDB
All DBs
Position
2329270..2331123
Genome browser
AA seq
617 aa
AA seq
DB search
MEEKEFVIDDHIDDHVDEEIKKCFDKKNKKSFFTFAGAGSGKTKSLINALTYIKDTYGYE
LLTYSRQVAVITYTNAACDEILDRINFSPLFAVSTIHSFLWELIKNQQRDIKNWIKNNTE
EEILELEKQQSRGRAGAAYDNRTKKIKSKKERLLKIETVRKFSYNPNGNNFRYDYLSHAE
VIKMGSEFIAKSDTMQNILINKYPILLIDESQDTKKELVDALLFLYEKHKSKIVIGMFGD
TMQKVYTDGKEDLTLCIPDDWVKPVKVMNHRSSNRIVKLANEIRKSFDDKIQRPRSNANE
GKVHLFIADSNSDKSKIENLVADSMYKLTDDDKWLVATECKTLILEHHMAGSRLKFLELF
KPLYSVDSLKTGILDGTLPEIQLLTNKVLPLILACKRDDKFQVAKMIKQYSPLVNKKAFG
EATKKPLLCLNRAYQSVKKLCKLWNYGKIPTCLEVIENIESTGLFEIPNRLQGIVDIKSN
ENIDEITNSLIKSFSTPFSQIEAYSAYINNETSFATHQGVKGLEFTRVVVIVDDDEAQGF
LFSYEKLFGAKEKSKTDIKNENEGKDTSIARTKRLFYVACTRAKQSLAIIAYTHDCNAVK
QSVIENNWFLEKEITIF
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaagaatttgtaattgatgatcatattgatgatcatgttgacgaagaaatt
aaaaaatgttttgataaaaaaaataagaagagtttttttacttttgcaggtgctggttca
ggaaaaacgaaaagtctcataaatgcattaacttatattaaagatacgtatggttatgaa
cttttaacatattcaagacaagttgctgttattacatatacaaatgctgcgtgtgacgaa
atattggatcgtataaactttagtccattatttgcagtttcaactattcatagtttttta
tgggaacttataaaaaatcagcaacgcgacataaaaaattggataaagaataatactgaa
gaagaaattttagaattggaaaaacaacaatcaagagggcgagctggtgctgcttacgat
aatagaactaaaaaaataaaatctaaaaaggaacgtttattaaaaattgaaacggtaaga
aaattttcatataatcctaatggaaataattttagatatgactatcttagccatgctgaa
gtaattaaaatgggatcagaatttattgctaaaagtgatactatgcaaaacatcttaatt
aataaatatcccattcttcttattgatgaaagtcaagatacaaaaaaagaattagtagat
gcattactttttctttatgaaaagcataaatcaaaaatagtaattggtatgtttggagat
accatgcaaaaagtttatacagatggaaaagaagatttgacattatgtattccagatgat
tgggttaaacctgttaaagtaatgaatcatagaagttccaatagaatagttaaattggcg
aatgaaataagaaaaagttttgatgataaaatacaaagaccacgttcaaatgccaatgaa
ggaaaggttcacttatttattgcggacagtaatagtgataaatctaaaatagaaaattta
gttgcagattctatgtataaacttacagatgatgataaatggttagtagcaactgaatgt
aaaactttaatacttgagcatcatatggcaggaagtagattgaaatttttggaattattc
aagccgttgtattcagtagattctctaaaaacaggcattcttgacggaacacttcctgag
atacaattacttactaataaagttttgccgttaatcttggcttgtaaaagagatgataaa
tttcaggttgccaaaatgattaagcaatattctccacttgttaataaaaaagcttttggt
gaagcgactaagaaacctttattatgcctaaacagagcatatcaatcagtaaagaagtta
tgtaaattatggaattatggaaagattcctacatgtttagaggttattgagaatatagag
agtactggtctatttgaaattcccaatagactacaaggtatagttgatataaaaagtaat
gaaaatatagatgaaattacgaactccttaataaaatcattttctacaccttttagccaa
atagaagcatattcggcatacattaataatgaaacatcatttgcaacacaccaaggtgtt
aaagggcttgaatttacacgtgtagtagtaattgttgatgatgatgaagcacaaggtttt
ctatttagttatgaaaaattatttggtgctaaagaaaaatcaaagacagatattaaaaat
gaaaatgaaggaaaggatactagtattgcaagaacaaaaagattattttatgttgcatgc
acacgcgcaaaacaaagcttagcaattatagcatatacgcatgattgtaatgctgttaaa
caaagtgtaattgaaaacaattggttcttagaaaaggaaattactattttctga
DBGET
integrated database retrieval system
