Clostridium drakei: B9W14_11705
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Entry
B9W14_11705 CDS
T05484
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cdrk
Clostridium drakei
Pathway
cdrk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdrk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B9W14_11705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdrk03019
]
B9W14_11705
03009 Ribosome biogenesis [BR:
cdrk03009
]
B9W14_11705
Enzymes [BR:
cdrk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B9W14_11705
Messenger RNA biogenesis [BR:
cdrk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B9W14_11705
Ribosome biogenesis [BR:
cdrk03009
]
Prokaryotic type
rRNA helicases
B9W14_11705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
UvrD-helicase
CMS1
Flavi_DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AWI05137
UniProt:
A0A2U8DQT5
LinkDB
All DBs
Position
2625602..2627044
Genome browser
AA seq
480 aa
AA seq
DB search
MSEIKFEDFRLGQDILKSIKNIGYKKPSKVQQQVIPLILKGKDVIVKSQTGSGKTAAFAI
PICEHMEIEENEAQALILTPTRELAVQIKEDISNIGRFKRIRCAAIFGKQPMDTQKKELK
QRVHIIVGTPGRTLDHIKRGNMNLENIKFLILDEADEMLNMGFIEEVSEIIENIPVSRQN
MLFSATMPEAIENLSKKYMKNPAKIEITPEKLTVDNIEQKCYIIEENNKFSLLRNLLYME
NPDTAIVFCRTKNNVDYVTSRMKAEKYSCDKIHGGMLQNERLDTMNSFKRGEFRFLIATD
VAARGIDIDNVTHVINYDLPMEKESYIHRIGRTGRAGNKGTAITFSTPNEDRFLSEIEDY
IQMEIQKCELPTEKDANENKEAFLSKNKIKPLKKGKTADLNREITKIYINAGKKKKIRPG
DIVGAISNSTGLSAEVIGVIDIHDTHSYIDILEGNGEKVLKALSEGTIKGKKVKVELASK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaataaaatttgaagattttagattagggcaggatatactaaaatccattaaa
aatataggatataagaaaccttctaaggttcaacaacaagtaatacctttaattctgaag
ggaaaagatgttatagtaaagtctcaaactggaagtggaaaaactgctgcctttgctatt
cctatatgtgaacatatggaaatagaagaaaatgaagctcaggcattaatactaactcca
actagagagttggcagttcagataaaagaagatataagtaatataggaagatttaaaaga
attagatgtgcagctatttttggtaaacagcctatggacacacaaaaaaaagaattaaag
cagagagtacatataatagttgggactccaggaagaactttggaccacataaaaagagga
aatatgaacctagaaaatataaagtttttaattttagatgaagctgatgaaatgcttaat
atgggattcatagaggaagtaagtgaaattatagaaaatattcctgtaagtagacaaaat
atgcttttttcagctactatgcctgaagcaatagaaaatttatcaaaaaaatacatgaaa
aatccagctaaaatagaaataactccagagaaacttacggtagataacatagaacaaaaa
tgttatattatagaagagaataacaaattttcgttacttagaaatttgctttatatggaa
aatccagatactgcaatagtattttgtagaacaaaaaataatgtggattacgttacaagc
agaatgaaggcagaaaaatattcttgtgataaaatacatggtggaatgcttcaaaatgaa
agattagatacaatgaatagttttaaaagaggagaatttagattccttatagctacagat
gtagctgctagaggtattgatatagataatgttactcatgtaataaattatgatttgcct
atggaaaaggaaagttatattcatagaataggaagaactggtagagcaggaaataaaggt
actgctataacattttctactccaaatgaagatagatttttaagtgaaatagaagattat
atacaaatggaaatacaaaaatgtgaacttccaacagaaaaagacgcaaatgaaaataaa
gaagcttttttaagtaaaaacaaaataaaaccgcttaaaaagggaaaaactgcagattta
aacagagagataacaaagatatacataaatgcaggaaagaaaaagaagattagaccggga
gatatagtaggagctatttcaaattctactggacttagtgcagaagtaataggagttata
gatattcatgacactcactcttatattgatatactagaaggaaatggtgagaaggtatta
aaggctcttagtgagggcactattaaaggtaaaaaagttaaagtagaattagctagtaaa
taa
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