Clostridium drakei: B9W14_11775
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Entry
B9W14_11775 CDS
T05484
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cdrk
Clostridium drakei
Pathway
cdrk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdrk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B9W14_11775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdrk03019
]
B9W14_11775
03400 DNA repair and recombination proteins [BR:
cdrk03400
]
B9W14_11775
Enzymes [BR:
cdrk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B9W14_11775
Messenger RNA biogenesis [BR:
cdrk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B9W14_11775
DNA repair and recombination proteins [BR:
cdrk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B9W14_11775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
RecQ-1-like_HTH
DUF763
Motif
Other DBs
NCBI-ProteinID:
AWI05149
UniProt:
A0A2U8DR99
LinkDB
All DBs
Position
2638152..2640287
Genome browser
AA seq
711 aa
AA seq
DB search
MLEEAKVLLKKYYGYDSFREGQEKVINSILEERDTFAIMPTGAGKSICYQIPALLMKGIT
IVISPLISLMKDQVDALNDIGVKASFINSSLDQYELQERILMAVSGYTKLLYVAPERLES
ESFCELIKTLNISMIAIDECHCVSQWGHDFRPSYRSIAPLIKKLDHKPIVSAFTATATNE
VKEDVVKLLGLKDSNVYTTGFDRKNLYFSVVRGENKKDYLLKYLENNKDQVGIIYAGTRK
EVDNIYESLKKKGYSIGKYHAGMSDTARTKAQEDFLYDNVNIIVATNAFGMGIDKSNVRY
VIHYNIPKNIEAYYQEAGRAGRDGEPSECILLFGAQDIMLQKFLIEQSIFSEERRINEYR
KLQDVVDYCHTTKCLRKFILEYFGETDVPEFCDNCSVCKDETELSDITIDAQKIFSCIAR
MKQRFGTVLVSQVLRGSKDKKVLDFGFEKLSTYGIMKNYTVKEIKDLINVLIADEYLYLT
ESQFPVVRLKEKAVSVLKGEENVFQKIHKANKKVVQENSLFLLLKSLRKAISEREAVPPY
IIFADAALRDMSEKLPENDEEFLDIKGVGESKLRKYGEEFLNTIRAYIEEHPSEKVSNKT
SKELMEDLSEKHDVPSHVVTLNMFNEGKSLEEISKERNLKFMTIEDHIMRCAMEGMDVNL
DFFIPKEYEECIFQAIEKSDSTKLRNIKEMLPEEVSYTAIKAALCKMKNSA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaagaggctaaagttttgttaaaaaaatattatggatatgatagttttagagaa
ggtcaagaaaaggtaataaatagtatattggaagaaagagatacctttgctataatgcct
acaggtgcaggtaagtctatatgctatcaaatacctgctcttttaatgaaggggataaca
atagttatatctccattgatatctcttatgaaggatcaagtagatgctcttaatgatata
ggagtaaaggcaagttttataaatagttcattagaccagtatgaacttcaggaaagaata
ttaatggcagtaagtggatatacgaaacttttatatgttgcaccagaaagattggaatct
gaaagcttttgtgaacttataaagacacttaatatatcaatgattgctatagatgaatgt
cactgtgtttcacaatgggggcatgattttagaccaagttataggtctattgcaccatta
ataaaaaaattggatcataaacctatagtttcagcttttacagctacagcaactaatgaa
gttaaggaagatgtagtaaaacttttgggtcttaaagattctaatgtgtatactacaggt
tttgatagaaaaaatttatatttttctgtggttagaggagaaaataagaaagattattta
cttaaatatttagaaaataataaagatcaagttggaataatttacgccgggactagaaaa
gaagtggacaatatttatgaatcccttaaaaagaaaggttattctataggaaaatatcat
gcaggtatgagtgatacagctagaacaaaagctcaagaggattttttgtatgataatgta
aatataattgtggctactaatgcctttggaatgggaattgataaatctaatgtaagatat
gttatacattataatatacctaagaatattgaagcctattatcaagaagcaggacgtgca
ggaagagatggagaaccaagtgaatgtattttattatttggagctcaggatattatgctt
caaaagtttctcatagaacaaagcatattttcagaagaaagaagaattaatgaatacagg
aagctccaggatgttgttgattattgtcatactactaaatgccttagaaaatttatttta
gaatactttggagaaactgatgtgccagagttttgtgataactgtagtgtttgtaaggac
gagacggagctttcagacataactatagatgctcaaaagatattttcatgcatagctcgt
atgaagcagaggtttgggactgttttagtatcacaggtattgagaggttcaaaggataaa
aaagtgttagatttcggatttgaaaaactttctacctatggaataatgaaaaattatact
gtaaaggaaataaaggatttaataaatgtacttatagcagatgaatatttatatcttact
gaaagccaatttcctgtagtaaggcttaaggaaaaagcagtaagtgttcttaaaggtgaa
gaaaatgtatttcaaaaaattcataaggctaataagaaagtcgttcaagaaaactctctt
tttttgctgcttaaatctcttagaaaagctatatcggaaagagaagcagtacctccttat
ataatttttgcagatgcagctttaagggatatgagtgaaaaacttcctgaaaatgatgaa
gaatttcttgatattaaaggtgttggagaatcaaagcttcgaaaatatggagaagaattt
ttaaataccataagagcttatatagaagaacatccttcagaaaaggtttcgaataaaact
agtaaagaattaatggaagatttgtctgaaaaacatgatgttccaagtcatgttgtaact
ttaaatatgtttaatgaaggaaaatccttagaagaaataagcaaggaaagaaacttaaaa
tttatgactattgaggatcatataatgagatgtgctatggaaggaatggatgtaaattta
gattttttcataccaaaagagtatgaagaatgcatttttcaagctatagaaaagtcagat
agtacaaaattaagaaatataaaagaaatgcttccagaagaggtaagctatactgctata
aaagcagctttatgcaaaatgaaaaattctgcataa
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