KEGG   Clostridium drakei: B9W14_20465
Entry
B9W14_20465       CDS       T05484                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
cdrk  Clostridium drakei
Pathway
cdrk03030  DNA replication
cdrk03410  Base excision repair
cdrk03420  Nucleotide excision repair
cdrk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cdrk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B9W14_20465
   03410 Base excision repair
    B9W14_20465
   03420 Nucleotide excision repair
    B9W14_20465
   03440 Homologous recombination
    B9W14_20465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cdrk03032]
    B9W14_20465
   03400 DNA repair and recombination proteins [BR:cdrk03400]
    B9W14_20465
Enzymes [BR:cdrk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     B9W14_20465
DNA replication proteins [BR:cdrk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     B9W14_20465
DNA repair and recombination proteins [BR:cdrk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     B9W14_20465
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B9W14_20465
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 HHH_2 Imm50 HHH_5
Other DBs
NCBI-ProteinID: AWI06768
UniProt: A0A2U8DVR0
LinkDB
Position
complement(4599809..4602451)
AA seq 880 aa
MSKEKLLILDGNSLMNRAFYALPPLTNSQGLHTNGVYGFVTMLLKMREEIDPNYIVCTFD
RSAPTFRHNEYKDYKAGRKRMPEELAEQFPVVKKLLNLLSISMFEIDGFEADDLIGTLSV
YAEKKDIEVYIVTGDKDALQLATDNVKVVITKKGITEKEIYDKSRMISEFEVTPTQFIDV
KGLMGDKSDNIPGVPGVGEKTAFKLIKEYGSIENVLNNIDNISGKKIKENLMEYSEQAVF
SKKLATIMLNVPIEIDLNEIKSKENYDVEGVKNLFIELQFKSLIDKVIGEKELKEEIEKE
DIKVDFKNISNIKDLKKFKEDIISIAKDEILYLTFKIIDGNIYSKSYIEKIFLNIDNRNY
VIEIQKIYEEDNEETLKSLKDIFENDKIEKVSHNVKVPYTVFKKMGINFTSVKFDTEIAA
YLIDSSRGEYELNSIIQDYLKIMLQGEEDEIKVKETSLLKDVFEILNKQIEKLNMEELLY
EVEQPLTLVLASMEYEGFRVDSVKLDKLGEKFKIEIDKLKTDIYGLAEEEFNINSPKQLG
KILFEKLDLPVIKKTKTGYSTNAEVLEQLLDKHPIIEKITHYRQFAKLYSTYIEGLKAVI
DKDRKIHSSFNQTVTTTGRLSSTEPNLQNIPIKYEMGREIRKVFVPEDENSIILSADYSQ
IELRVLAHIADDENLISAFFNHSDIHTKTASEVFKVPIDQVTKLQRSNAKAVNFGIVYGI
GDFSLAKDLKISRKEAKNYIDTYFERYPGVKRYMDTVIKQAEDNLYVTTIMNRRRFIPEI
KNSKKMVKAFGERLAMNTPIQGSAADIIKMSMVNVYNVLKSKNLKSKVILQVHDELILNV
YKDELEEVKELVKNQMEDVMKLKVPLEVDVNVGDNWYEAK
NT seq 2643 nt   +upstreamnt  +downstreamnt
atgtctaaagaaaagttattaatacttgatggaaatagtttaatgaatagagcgttttat
gcactgccaccgttaactaactctcaaggactacatactaatggagtatatggttttgta
acaatgcttttaaaaatgagagaagaaattgatcctaattatatagtttgtacgtttgat
agaagtgctcctacatttagacacaatgaatataaagattataaagcaggtagaaaaaga
atgccagaggagcttgcagaacagttccctgtagtaaaaaagctattaaatctgctttct
ataagtatgtttgaaattgatggatttgaagcagatgaccttataggaaccctttctgta
tatgcagaaaagaaagatatagaagtttatatagtcacaggagataaagatgcgcttcaa
ttagcaacagataatgtaaaagttgttataactaaaaaaggaattacagaaaaagagata
tatgataagagtagaatgatttcagaatttgaagttactccaactcaatttatagatgta
aaaggtctaatgggagacaaatcggataatatacctggtgtcccaggggttggtgaaaaa
acggcatttaagcttataaaagaatatggaagcatagaaaatgtattaaataatatagat
aatattagtggaaaaaaaataaaagaaaatttaatggagtatagtgaacaggcagtattt
agcaagaagctagctactatcatgcttaatgttcctatagaaatagatttaaatgaaata
aaatctaaggaaaattatgatgtagaaggtgtaaaaaatttatttatagagcttcaattt
aaatcacttatagataaagtaataggtgaaaaagaattaaaggaagaaattgaaaaagaa
gatattaaagttgactttaaaaatataagtaatataaaggatttaaaaaagtttaaggaa
gacataatttcaattgcaaaggatgaaattttatacttaacttttaaaattatagatggc
aatatttactcaaaaagttatatagaaaagatatttttaaatatagataatagaaattat
gtaatagaaattcaaaaaatatatgaagaagataatgaagagacattaaaatcccttaag
gatatatttgaaaatgataaaatagaaaaagtaagtcataatgtaaaagttccatatact
gtatttaagaaaatgggaataaactttactagtgtaaaatttgatacagaaatagctgct
tatttaattgattcttctagaggagaatatgaattaaattctattatacaggattatctt
aaaataatgcttcaaggagaagaagatgaaatcaaagtaaaggaaacctctcttttaaaa
gatgtttttgaaattctgaataaacaaatagaaaaattgaatatggaagaacttctatat
gaggtagaacagccacttacattagttttagcatctatggaatatgaaggctttagggtt
gatagtgtaaaattagataaactaggagaaaagtttaagatagaaatagataagcttaag
acggatatatatgggttggcagaagaagaatttaatattaattcacctaagcagcttgga
aaaatattatttgaaaaacttgatttacctgtaattaaaaagactaaaacgggatattcc
actaatgcagaggttttagaacagcttttagataaacatcctattatagaaaaaataact
cattatagacagtttgctaagctttattctacatatattgaaggattaaaagctgtaatt
gataaagatagaaagatacattctagttttaatcaaacagttactactacaggaagatta
tcaagtacagaacctaatcttcaaaatataccaataaagtatgaaatgggtagagaaata
agaaaagtatttgtacctgaagatgaaaattcaataatactttcagcagattattcacaa
atagaacttagagtacttgctcatatagctgatgatgaaaatttaataagtgcttttttt
aatcatagtgatattcatactaaaaccgcatcagaagtatttaaagttcctatagatcag
gttactaaacttcaaagaagcaatgctaaggctgtaaactttggaatagtttatggtata
ggtgactttagtttagctaaggatttaaagatatcaagaaaagaagctaagaattatata
gatacttattttgaaagatatccaggtgtaaaaaggtatatggatactgttataaagcag
gcagaagataatttgtatgtaactactataatgaatagaagaaggtttatacctgaaata
aaaaattctaaaaagatggtaaaggctttcggtgaaagattggccatgaatacacctatt
caaggtagtgctgcagatataataaagatgtctatggtaaatgtatataatgttctaaaa
agtaaaaatttgaagagtaaagtaatacttcaagtgcatgatgaacttattttgaatgta
tataaggatgaattagaagaagtaaaagaattagtaaaaaatcaaatggaagatgttatg
aaattaaaagtgcctttagaggttgatgttaatgttggagataattggtacgaggcaaaa
taa

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