Corynebacterium diphtheriae C7 (beta): CDC7B_0958
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Entry
CDC7B_0958 CDS
T01699
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cds
Corynebacterium diphtheriae C7 (beta)
Pathway
cds03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cds00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDC7B_0958 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cds03021
]
CDC7B_0958 (rho)
03019 Messenger RNA biogenesis [BR:
cds03019
]
CDC7B_0958 (rho)
Transcription machinery [BR:
cds03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CDC7B_0958 (rho)
Messenger RNA biogenesis [BR:
cds03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CDC7B_0958 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEX67154
LinkDB
All DBs
Position
981946..984009
Genome browser
AA seq
687 aa
AA seq
DB search
MTNTDNSAQRNLAALRLPELRKIAAEMGLKGTSALRKGDLIAAINGTSAAHPTSVAPSEE
NKADAPKKERPARRRATKHVAQDAGSEPAPVVTEVAAPAEQNPAPKQEKEAPAGESERQP
RRRRAVKTSVKTTQEEPAEVRVAEATDKSSEEQSAEAGSEDKDNYHYESRSAARRARRNR
ARREQREYNRPGAKDESEASQPENENSRNDVAPESSEVADNSNEQARSDQADQSTKSDSH
DNGREDNRRGNRHERGERGDRNDRGDRNRRNRRNRRGRDRDDNRDNRENNNNEPREDEVL
QNVAGILDIVDNNVAFVRTSGYHAGAADVYVNNQMIRRLGLRSGDAIVGQVRMNGENNHG
GHNRGRNRQKYNPLVRVDSVNGMTVEEAKARPEFAKLTPLYPNQRLRLETESKVLTTRVI
DLIMPIGKGQRALIVSPPKAGKTTILQNIANAIATNNPECYLMVVLVDERPEEVTDMQRS
VKGEVIASTFDRPPSEHTAVAELAIERAKRLVEQGQDVVVLLDSITRLGRAYNNSSPASG
RILSGGVDSNALYPPKRFLGAARNIENGGSLTIIATAMVETGSAGDTVIFEEFKGTGNAE
LKLDRKISERRVFPAVDVNPSGTRKDELLLAPEEARIMHKLRRMLSALDNQQAIDLLIKQ
LKKTKSNGEFLMQVASSAPMAADAEED
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
gtgactaatacagataacagcgcacagcgtaatctcgctgctctgcgtttgcccgaactg
cgcaaaattgccgcagaaatgggcctgaaaggtacgtccgccctgcgtaagggtgatcta
attgcggctattaacggtacctctgccgctcatccaacatctgtggccccctcggaagag
aacaaagcagatgcaccaaagaaggaacgtccagcacgtcgtcgtgcgactaagcacgtt
gcccaagatgccggttccgagccagcgccagtggtaacagaagttgctgcgcctgcagaa
cagaatcctgcgccaaaacaagaaaaagaagctccagctggtgagtccgagcgtcagcca
cgccgtcgtcgtgcagtaaagacgtctgtgaaaacaacgcaggaggaacccgctgaggtt
cgcgtagcagaagctactgacaaatcttctgaagagcagtctgctgaggcaggttctgag
gataaagataactaccactacgagtctcgttctgccgctcgacgtgcccgtcgtaaccgt
gctcgtcgtgagcagcgcgaatacaatcgccctggcgctaaagatgagagcgaagcatct
cagccagaaaatgagaattctcgcaacgacgtcgcaccagaatcctctgaggtagcagac
aacagcaacgagcaagctcgttctgatcaagctgatcaatccaccaagtcggactctcac
gacaatggtcgtgaggacaaccgccgtggcaatcgacacgagcgtggggagcgtggcgat
cgtaacgatcgtggggaccgcaaccgtcgtaatcgtcgtaaccgtcgtggccgtgaccgt
gatgataaccgtgataatcgcgaaaataacaacaacgaaccacgtgaagatgaagtcttg
caaaatgttgcaggcatcttggacatcgtggacaacaatgttgctttcgtgcgtacctcc
ggttaccacgccggtgccgctgacgtctatgtgaacaaccagatgattcgccgcttggga
ttgcgttctggcgacgcaattgtgggccaagttcgtatgaatggcgaaaacaaccacggc
ggacacaaccgtggccgtaaccgccagaagtacaacccattggtacgcgttgattcagtc
aacgggatgacggtggaagaagcaaaggcacgccctgagtttgctaagctcaccccgttg
taccccaaccagcgtctgcgcctcgaaaccgagtctaaggttttgactacccgtgtgatc
gatttgatcatgccgattggtaaaggtcagcgtgctttgatcgtgtctcctcctaaggct
ggtaagaccacgatcctgcaaaatatcgcaaacgctattgctaccaacaacccagagtgc
tacctcatggttgttttggtggatgagcgtccggaagaagttaccgatatgcagcgttct
gtgaagggcgaagttattgcatcgaccttcgaccgtccaccaagcgagcacaccgctgtt
gcagagctcgctattgagcgtgcgaagcgccttgtggagcagggacaggatgttgttgtc
ctcctagactccattacgcgtcttggccgtgcctacaacaacagctcacctgcatccggc
cgaattctctccggtggtgtggactccaacgcgttgtacccaccaaagcgtttccttggt
gcggctcgcaacatcgaaaatggtggatcgcttacgattatcgccacggccatggttgag
actggttctgccggcgacaccgtgatcttcgaggaattcaagggcaccggtaacgccgag
ctgaagctggatcgtaagatttctgagcgccgtgtattcccagctgtcgacgtcaaccca
tcgggtacccgtaaggatgagttgctgctggctccggaagaagctcgcattatgcacaaa
ctccgccgcatgctttctgctttggataatcagcaggctatcgatttgttgatcaagcag
ctcaagaagaccaagtccaatggtgaattcttgatgcaggtagcaagttctgcgccgatg
gctgcggatgctgaggaggactaa
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