Corynebacterium diphtheriae HC01: CDHC01_0487
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Entry
CDHC01_0487 CDS
T01693
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cdt
Corynebacterium diphtheriae HC01
Pathway
cdt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cdt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CDHC01_0487 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdt03021
]
CDHC01_0487 (rpoA)
03400 DNA repair and recombination proteins [BR:
cdt03400
]
CDHC01_0487 (rpoA)
Enzymes [BR:
cdt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CDHC01_0487 (rpoA)
Transcription machinery [BR:
cdt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CDHC01_0487 (rpoA)
DNA repair and recombination proteins [BR:
cdt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CDHC01_0487 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AEX73740
LinkDB
All DBs
Position
476289..477305
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AA seq
338 aa
AA seq
DB search
MLISQRPTLTEEYVDSARSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIKIDGVL
HEFTTINGVKEDVSDIILNIKGLVLSSDSDEPVVMYLRKEGAGVITAGDIEPPAGVEIHN
PDLHLATLNEQGRLDIEMIVERGRGYVPATLYSGPAEIGRIPVDQIYSPVLKVSYKVEAT
RVEQRTDFDKLIIDVETKNSMAPRDALASAGKTLVELFGLARELNTAAEGIEIGPSPQET
EYIAAYGMPIEDLNFSVRSYNCLKRQEIHTVGELAECTESDLLDIRNFGQKSINEVKIKL
AGLGLTLKDAPEDFDPTQLDGYDAATGDYIDTDPEETE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgctcatttctcagcgcccaacccttaccgaggaatacgtcgattccgctcgctcgcgc
ttcgttatcgagccacttgagcctggcttcggctacaccctaggtaattcgctgcgtcgt
accctgctttcgtccatcccaggcgcagcagtaaccagcatcaagattgatggtgtgctc
cacgagttcaccaccatcaacggtgtgaaggaagatgtctccgacatcatcttgaacatc
aagggccttgtgctttcttctgactccgatgagccagttgttatgtacctgcgcaaggaa
ggcgctggcgttattactgctggtgacattgagccaccagcaggcgtggagattcacaac
ccggatctgcacctcgcaacccttaatgagcaggggcgtctggacatcgagatgattgtt
gagcgtggccgtggctacgttccagcaactctttactccggcccagctgaaatcggccgt
atcccagttgaccagatttactccccggtattgaaggtcagctacaaggttgaagctact
cgtgttgagcagcgcaccgactttgacaagctgatcatcgacgtggaaaccaagaactct
atggctccacgtgacgcactcgcgtctgcaggcaagacccttgttgagctgttcggcctc
gcacgcgagctgaacaccgcagccgaaggcatcgagatcggaccttctccacaggagacc
gagtacatcgctgcttacggcatgccaatcgaggatctgaacttctctgttcgttcctac
aactgcctgaagcgccaggaaatccacacggtcggtgagctcgcagagtgcaccgaatcc
gatctgctggatatccgcaacttcgggcagaagtcgatcaacgaagtaaagatcaagctc
gctggcttgggtttgaccctcaaggatgctccagaggacttcgatccaactcagctcgat
ggctatgacgctgcaaccggcgactacatcgacacggatcctgaagaaaccgagtaa
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