Corynebacterium diphtheriae HC01: CDHC01_1168
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Entry
CDHC01_1168 CDS
T01693
Name
(GenBank) putative helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
cdt
Corynebacterium diphtheriae HC01
Brite
KEGG Orthology (KO) [BR:
cdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdt03019
]
CDHC01_1168
Enzymes [BR:
cdt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CDHC01_1168
Messenger RNA biogenesis [BR:
cdt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CDHC01_1168
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
SH3_HelY
ResIII
DEXQc_Suv3
Helicase_C
MTR4-like_stalk
AAA_22
UCP029505
Motif
Other DBs
NCBI-ProteinID:
AEX74419
LinkDB
All DBs
Position
complement(1214583..1217375)
Genome browser
AA seq
930 aa
AA seq
DB search
MNATVEPESHLSYFAARQKFPLDEFQIRGCQAVESGRGVLVCAPTGAGKTIVGEFAVSLA
ISQQTKCFYTTPIKALSNQKFHDLVKAHGEDKVGLLTGDVSINRDADIVVMTAEVLRNMI
YADSEALDRLSHVVMDEIHFLSDSSRGPVWEEAILGLDASVNVIGLSATVSNSEEFGRWL
NTVRGDTEIIVSENRPVPLNQWMLVARRMHPLFEPGTTGEVNSRLVEHIERLEGTTTDGT
EYGRAQLKAGGFRNRSRAMGSDNRASRRSPHRLSDKHRALSRPDVLHILQEQDMLPAITF
IFSRAGCDAALHQCMRSSLVLTTQEESEEISDIITAGVAGIPEEDLRLLEYRRWRQALMR
GFAAHHAGMLPAFRHVVEKLFTKGLVRAVFATETLALGINMPARTVVLEKLVKFNGEGHA
DLTPGQYTQLTGRAGRRGIDVIGNAVVQWTPAMDPGQVAGLASTRTYPLVSTFAPGYNMS
VNLLKTIGFEPAHRLLEKSFAQFQADGSVVDDIKAIESLEESVDQLTKQLHAAFDSHDQG
GAGDVDSFLEYIRIRRELTEEERKHKRLSIEQRDMETTRVLSKLQLGDVIAMPGKKHPLL
AVVVNPANNKKDPRVWITMETGWSGRVGTDAFAMPPVAIGHMRLSRQTIAQPRKNSRFVV
DQFRKANFQRPRRLKTSPRNRPNATISALREQLRSHPAHHWRKREDLARVGEQLVREQRM
LEAAQRKVNEATDTLGRTFDRIINLLAEYDYVEFHDGVPVITEEGENLCQIHNESDLLVA
QCLKRGIWDDLDPAELAGVVSMCTFENRRETRGEPDAATEEMAKAMNNTVRIWEELSSDE
RRYRLPITRYPEGGFALAMHQWAAGAPLGYCIAAASESGAELTPGDFVRQCRQVVDLLEQ
VRSTAYNNDTRRAARKAIDAIRRGVVAIGN
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccaccgtggaaccagaatcacacttgagctattttgctgcacgtcaaaaattt
ccacttgatgaatttcaaatccgagggtgccaagcggtagaaagcggccgtggtgtccta
gtttgtgcacctacgggtgctggaaaaactattgtcggtgaatttgctgtttcacttgct
atttcgcaacaaacaaagtgtttctacaccacaccaattaaggcgcttagtaaccagaaa
tttcacgaccttgtaaaggctcatggtgaagataaagtcggcctacttactggtgatgtt
tctattaaccgcgatgccgacatcgttgtcatgactgctgaagttcttcgaaatatgatc
tatgcagattcagaggctttagatcggctgagtcacgtcgtaatggatgagattcacttt
ttatctgactcctcccgcggcccagtttgggaagaagcaatcctcggtcttgacgcatct
gtgaacgtgatcggtttatctgcgacggtgagcaattcagaggaattcggccggtggttg
aatactgttcgcggtgataccgaaattatcgtttcggaaaaccgccctgtacccctcaac
caatggatgctcgttgcccgtcgtatgcatcctttatttgagcccggcacaacgggagaa
gtcaatagtcgtctcgtcgagcacatcgagcgcctcgaaggaacgaccacagatggcact
gagtacggccgcgcccagctcaaagctggaggattccgaaatagatctcgtgcaatgggc
tcagataaccgagcttcgcgacgatccccgcaccgcctttcggacaagcatcgagcctta
tcacgcccagatgtccttcatatcttgcaagaacaggacatgctaccagcgattacgttt
attttctcacgcgccggttgtgacgccgcactccatcaatgtatgcgatcgagcctagtc
cttactactcaagaagaatcagaagaaatctccgatatcattaccgctggcgtagcggga
atacccgaagaggaccttcgtctacttgagtatcgtcgctggcgccaagcgctaatgcgt
ggatttgctgcgcatcacgcgggtatgttgcctgcttttcgccatgtcgtggaaaaacta
tttaccaaaggactagttcgagcggttttcgctacagaaacattggcacttggtatcaac
atgccggcacgcacggttgttttagaaaaactcgtgaaattcaatggcgaagggcacgcc
gatctaacgcctggacaatatacgcagttgaccggacgcgctggccgtcgaggtatcgat
gtcattggaaacgcggtggtgcaatggacaccggcgatggatccaggacaagttgctggg
cttgcctctactcgcacttatccactggtctctacctttgcaccgggttacaacatgtcg
gtgaacttactgaagactatcggatttgaacctgcgcatcgcttgttagaaaaatccttt
gcccaattccaagccgatggcagtgttgttgatgatattaaagcaatcgaatccttagaa
gaatccgtcgatcaattaactaaacaacttcatgctgcctttgatagtcacgatcaaggc
ggtgcaggagacgtcgatagtttcttggagtacatccgcatacgtcgtgagctcaccgaa
gaagaacgcaaacataagcgattgtctattgagcaacgtgatatggaaacgacaagggtc
ttaagcaagctacagctcggtgatgtgatagcaatgcctggcaaaaagcatccgctatta
gctgtagtggttaatccagctaataataaaaaagatccacgcgtatggatcaccatggaa
acaggttggtctggacgcgtaggaacagatgcatttgcgatgcctccagttgccattggc
catatgcgtttgagcaggcaaactattgcacaaccacgtaaaaattcgcgttttgtagtt
gaccagttccgaaaagcgaatttccaacgtcctagacggctgaaaacttctccgcggaat
cgccctaatgcgacgatttcggcgctgagggaacagcttcgttcacaccccgcgcatcat
tggcgcaagagggaagatctcgctcgggtgggggagcaattggttcgagagcaacgcatg
cttgaggcagctcaacgcaaagtcaacgaggcaaccgatacgctgggtcgtactttcgat
cgaattatcaacttgcttgccgaatatgattacgtcgaattccatgacggggtacctgta
attaccgaggaaggcgaaaacctctgccagattcataacgagtctgacctattagtggca
caatgcctcaaacgaggaatctgggatgacctagatccagcagaattagctggtgtagtt
agcatgtgtacttttgaaaaccgccgagaaactcgcggagaacctgacgctgccaccgaa
gaaatggcgaaagccatgaacaacacagtgcgtatctgggaggaactcagctctgacgag
cgtcgttatcggctgcccatcactaggtatcccgaaggtggattcgcattagcgatgcat
caatgggcggcaggcgctccactcggctattgcattgctgctgcctcggaatccggagcc
gaacttacacctggagattttgttcgtcaatgccgacaagttgtcgatttgctcgaacaa
gtacgatcgactgcttacaataacgacactcggcgtgctgcgcgcaaggctatcgacgct
atccgcagaggcgtcgtggcgatcggaaactag
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