Corynebacterium diphtheriae HC01: CDHC01_1340
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Entry
CDHC01_1340 CDS
T01693
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cdt
Corynebacterium diphtheriae HC01
Brite
KEGG Orthology (KO) [BR:
cdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdt03016
]
CDHC01_1340 (rnd)
Enzymes [BR:
cdt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CDHC01_1340 (rnd)
Transfer RNA biogenesis [BR:
cdt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CDHC01_1340 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AEX74589
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All DBs
Position
1402041..1403264
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AA seq
407 aa
AA seq
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MALLVTQPSEGLPPLAATSRSIYEAAYQLSQGTGPFAIDTERAGAYRYDDRAYLLQIRRE
GSGTVLIDPEANRRLVTSVLGKVINNQPWIIHAAATDLPCLSELGFYPSTIFDTELAGRL
AGLPRVNLASMLEERLEVTLKKAHGAEDWSRRPLPHSWLVYAALDVEKLIPLAESMKLLL
EAHGKLEWHKQECAHLINASSHGLDTQRSWQDMKGVSRLTRPRQLVVAEALWELRDDEAR
MKNTSVSRLLPDKVLISVAQRPPRNSQAALRASEIPKQYRKRIARWMPTINDVLESDPRT
WPHTPQFDENQLPSKYVWEKIHPESLDDFEEVKNSIVEKALLLNLPAENLMQPHSVKELC
WQLRDVPRPIAQDDVIECLMRLEARPWQIDNSASVITDTLNKIEHAS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcacttttagtcactcaaccgagtgagggattacccccgctcgctgcaacttcccgg
tcgatttacgaggcagcttatcaactgtctcagggcactggccctttcgcaattgatact
gaacgcgctggagcttatcgttatgatgaccgcgcttatctcttacagattcgtcgcgaa
ggaagcggcacagtacttatcgacccagaagctaatcgacgattagtcacatctgtacta
ggcaaggtaataaacaatcaaccgtggattatccatgccgcggcaacagacctcccctgt
ctttccgagttaggtttctaccccagtacaattttcgatactgaattagcaggaagactc
gctggattgccgcgagttaatttagcgtccatgctcgaagagcgcttggaagttaccctc
aaaaaggcacacggtgccgaagactggtcacgtcgcccgcttccccacagttggctcgtt
tatgcagccttagacgtcgagaagctcattccacttgcagaatccatgaaactcctccta
gaggctcatggaaaattagaatggcacaaacaagaatgtgcgcatctcataaatgcaagc
agtcatggcttagacacacagcgtagctggcaagatatgaagggggtaagccgtcttacc
cgacctcggcagctagtcgttgccgaagccctctgggagttacgcgacgatgaagctcgt
atgaaaaatacatccgtatctcgcttgttgccggacaaagtactgatttccgttgcacag
cgtccacctcgcaattcacaagctgctctacgtgcctcagagattcctaaacagtaccgt
aagcggatcgctcgttggatgccgacaatcaacgatgttttggaatccgatccacgcact
tggccacacacaccacaattcgatgagaatcagttgccatcaaagtacgtttgggaaaag
attcatcccgaatctttagatgactttgaagaggtaaaaaattccatcgttgaaaaggcg
ctacttctaaatcttccagcagaaaatctcatgcagccgcactcggttaaagaattatgc
tggcaacttcgagatgtaccacgaccgatcgcacaagacgatgtaattgaatgccttatg
agattggaggcacgaccttggcaaatcgacaacagtgcgtcagtaattacagatacactc
aacaaaattgagcacgcctcatag
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