Corynebacterium diphtheriae HC01: CDHC01_1408
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Entry
CDHC01_1408 CDS
T01693
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cdt
Corynebacterium diphtheriae HC01
Pathway
cdt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDHC01_1408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdt03019
]
CDHC01_1408
Messenger RNA biogenesis [BR:
cdt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CDHC01_1408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AEX74654
LinkDB
All DBs
Position
complement(1470170..1472224)
Genome browser
AA seq
684 aa
AA seq
DB search
MTEPRSRARKVTRKAGPPEAAETPVFQAPDSTATAEPADSAVKNSEKAEKDSSAESSRNN
RGRNAQRGGRNRRGNGSSNRSSQSKNNQSSNRGRRTPVKSMQGADLTQRLPEPPKAPKNG
LRIYALGGISEIGRNMTVFEYNNRLLIVDCGVLFPSSGEPGVDLILPDFGPIENKLDKVD
ALVITHGHEDHIGAIPWLLKLRPDMPILASKFTMALIAAKCREHRQRPKLIEVNEKSDIN
RGPFNIRFWAVNHSIPDCLGVAIKTGAGLVIHTGDVKLDQTPPDGRPTDLPALSRFGDEG
VDLLLCESTNATVPGFSGSEADVAPTLKRLISDAKQRVILASFASNVYRVQAAVDAAVAA
GRKVAFNGRSMIRNMEIAEKMGYLKAPRGTIVSMDDAAKMAPHKVVLITTGTQGEPMAAL
SRMARREHRQITVRDGDLIILSSSLVPGNEEAVFGVMNMLSQIGATVVTGRDAKVHTSGH
GFAGELLFLYNAARPKNVMPVHGEWRHLRANKELAISTGVEADRVVLAQNGVVVDLVDGR
ARVVGQMQVGHLYVDGVTMGDIDAEVLEERTSLGEGGLIAITAVIDSRTARLLERPTVQA
KGFSEDAVAMMPEVTELVEKTMNDLAAEGENDPYRMVQQLRRRVSRFVEQKWRRKPMIMP
TVIPTTSATIDIDDADVRASRESQ
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacctcgtagccgtgcgcgcaaggttacccgtaaagctggacctccggaagct
gcggagacgccagttttccaagcacctgattctactgcgacggctgagccggcagattct
gccgtaaagaactccgaaaaggctgaaaaagattcttctgcggagtcttcacgaaacaac
cgcggacgcaacgctcagcgcggtggtcgtaatcgtcgtggaaatggttcttctaatcgt
tcttcacaatcgaagaacaaccagtccagcaatagaggacgacgcacccctgtgaaatcg
atgcagggtgcagatcttacgcagaggctgcctgagccacctaaggctccgaagaatggt
ctgcgcatttatgccttgggtggtatttctgagattggtcgtaacatgaccgtcttcgag
tacaacaatcgtttgttgatcgttgactgtggcgttttgttcccgtcatcgggtgagccg
ggagtggacctaattcttccggactttggaccgatcgagaataagctcgacaaagttgat
gctttggtgattactcatggtcacgaagaccacatcggtgcaattccgtggctgcttaag
ttgcgtccggatatgccgattttggcttccaagttcactatggcattgattgctgcaaag
tgccgtgagcatcgtcagcgtccgaagctcattgaagtgaacgagaaatcggatatcaac
cgcggtccgttcaacattcgcttctgggcagtcaaccactcgattcctgattgcctcggc
gttgctattaaaactggtgccggattggttattcatactggcgacgtgaagcttgatcag
accccaccagatggtcgcccaaccgatttgcctgcactttctcgcttcggtgatgaggga
gtggatttgcttctttgtgagtcaaccaatgcgactgttccgggattctctggttctgaa
gcagacgtggctccaactttgaagcgcctgatcagtgatgcaaagcaacgtgttatcttg
gcgtcattcgcatcaaacgtctatcgcgttcaggcagccgttgatgcggctgttgctgcg
ggtcgtaaggtagcgtttaatggacgctccatgattcgaaacatggaaatcgccgagaag
atgggctatttgaaagcccctcgtggcaccattgtcagcatggatgatgcagccaagatg
gcgccgcacaaggttgtactgatcacaactggtacccagggcgaacctatggcagctttg
tcgcgtatggcacgtcgtgagcatcgacaaatcactgttcgtgatggcgatttgatcatt
ctgtcgtcttcattggttccaggtaacgaagaagcagttttcggtgtaatgaatatgctg
tcccagattggtgcgactgtggtaactggccgtgatgccaaggtccacacctcgggacac
ggattcgccggagagctgttgttcctatacaacgctgctcgtcctaagaacgtcatgccg
gttcacggcgaatggcgacacctgcgggctaacaaggaactggctatttccaccggtgtg
gaagcagaccgagttgtattagctcaaaacggtgttgtagttgaccttgttgatggtcgt
gctcgtgttgttggtcagatgcaggttggacacctttatgttgatggtgtgaccatgggc
gatattgatgctgaagttttggaagaacgtacttccttgggtgaaggcggcttgatcgct
attaccgcagttattgattcgcgtactgctcgattgcttgagcgtccgacagtccaagcc
aagggattctctgaagacgcagtagcgatgatgccagaggtaactgagctggttgaaaag
acgatgaacgatctggctgcagaaggcgaaaatgatccatatcgtatggttcagcagttg
cgccgtcgtgtttcacgattcgtcgagcagaagtggcgtcgtaagccaatgattatgcca
acggtcatcccgactacatcagcgaccatcgatatcgatgacgctgatgtgcgtgcgagc
cgcgaaagtcagtag
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integrated database retrieval system
