Candida dubliniensis: CD36_03160
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Entry
CD36_03160 CDS
T01140
Name
(RefSeq) ATP-dependent chromodomain helicase, putative
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cdu
Candida dubliniensis
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdu03021
]
CD36_03160
03036 Chromosome and associated proteins [BR:
cdu03036
]
CD36_03160
Transcription machinery [BR:
cdu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
CD36_03160
Chromosome and associated proteins [BR:
cdu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
CD36_03160
SLIK complex
CD36_03160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHD1-like_C
Cdh1_DBD_1
Helicase_C
HTH_Hrp3
Chromo
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
8044524
NCBI-ProteinID:
XP_002416988
UniProt:
B9W7B7
LinkDB
All DBs
Position
1:723061..727281
Genome browser
AA seq
1406 aa
AA seq
DB search
MVKQYIPEEAELNPELYGLRRSHRERRGPTIVESDSEEDVAPSRKKKKIQDDYEDEISMD
EDENDEFDDDDDIYYDGSFGVGKRKKSKPKTSRKQKTKKTKARKTKESPSPPQELRFSTR
NNKQVNYAIDYDEDDADLLESEPEFDEEDEEGDYYYYQQAIEPENERGIDIVMDHKLNEE
NTEKTGDPKSDYLFKIKWTDASHLHNTWEKYQDLKSFKGFRKLDNYIKQFIIYDDEIRND
PLTTKEDLEAMDIERERKRDEQEEYTHVERIVDSERVETDDGETKLQYFVKWKRLYYDEC
SWEDAKEIAKIAPEQVTKYQQRLNSKILPSLSANYPLSQRPRFEKLFKQPVFIKNGELRD
FQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIYARRQNGPHLVVVPLSTVP
AWQETFEKWAPDVNCVYYMGNGEARKTVREYELYNQNNKPKFNVLLTTYEYILKDRTELG
AFKWQFLAVDEAHRLKNAESSLYEALKSFRVSNRLLITGTPLQNNVKELAALCNFLMPGK
FTIDQEIDFETIDSEQEQYIKDLQKKISPFILRRLKKDVEKSLPSKSERILRVELSDIQT
EYYKNIITKNYAALNAGNRGSQISLLNIMSELKKASNHPYLFDGAEEKVLDKEGSHSREN
TLKGIVMSSGKMVLLEQLLSRLKKEGHRVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTV
PSSKRKIAIDHFNALGSKDFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARA
HRIGQKNHVSVYRFVSKDTVEEQILERARKKMVLEYAIISLGITDPNAKSSSKTEPSTNE
LSQILKFGAGTMFKENNNQQKLENLNLDDVLSHAEDHVTTPELGESNLGSEEFLKQFEVT
DYKADVEWDDIIPQEELTKLKDEEKRKADEQYLQDQIAMYSRRKAAIRKFENGSSVPSDV
EDSGEDSRPLRRRNAGDHQLSEKEIRGIYRSILKWGELSGKWEQLVEEGSITNKNPVLVK
HAYNEIISTSKQLVKEEEARRGVVLAELERKAEEQKRRPPVPGEPNQTALWIAKKKEKKA
VLFEYQGVKNINAELVLNRPVDMKLLEKIVTKTDFMNFVLPRHPKQVQAWSCEWTAKDDA
MLLVGVYKFGYGSWVQIRDDPLLGLQNKLFLENPSTGKDPATKQDGKETVKKVPGSVHLG
RRVDYLFTLLRDEESDSSVGGSTPVASVRKRIKKSTPVPHNSSNSNGSHNTNTSNSNGGT
ANNTGKHRKPVKLESSEKLIKQKRTNQRRNSASASPALGYAKFKEEKRELEYESMDEGSC
KSIMQPVTNSLHKLHKGSKGLDKHEWAKILKSELLNIGDFIESEVRKVQNKDKLRKHLWS
FTGLYWPSKVPSNKIGAMYNRLKQSN
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagcaatatatcccggaagaagctgagttaaatccagaattatatggcttaaga
agatcacatcgtgaaagacgtggtcctacaattgtggaatccgattcagaggaagatgtt
gcaccatctagaaaaaagaaaaaaattcaggatgattatgaggatgaaatttcaatggat
gaagatgagaatgacgagtttgacgacgacgatgacatatattatgatggtagttttggt
gttggtaaaagaaaaaagtccaaaccaaaaacttcaagaaaacaaaagaccaaaaagacc
aaagccaggaaaaccaaggaatcaccttcgccgccacaggagttaagattttcaacaaga
aataacaagcaggttaattatgcaattgactacgacgaagatgacgctgatttgttggaa
agtgaacctgagtttgatgaagaggatgaagaaggtgactactattactatcaacaagca
attgagcccgaaaatgaacgtgggatagacatagtcatggatcataagttgaatgaagag
aatacggagaaaactggtgatcccaagagtgattatctattcaaaatcaaatggacagat
gcttctcatttgcacaacacttgggaaaagtatcaagacttgaaactgtttaaaggtttt
agaaaattggataattatataaagcagttcatcatctatgacgatgaaattagaaatgat
ccgttgactactaaagaagacctagaagcaatggacatagaaagagaacgcaagcgagat
gaacaagaagagtatactcatgtcgagcgaattgttgatagcgagagggttgaaactgat
gatggggaaaccaagctacaatattttgtcaaatggaaacgactttattacgatgaatgc
tcttgggaagatgccaaggaaatagcaaagattgcacctgagcaagtaactaaatatcag
caaagattgaattcaaaaatcttgcccagtctttctgctaactatcccctctctcaacga
ccaaggtttgagaagttgtttaagcaacctgtatttatcaagaatggtgaattgagagat
ttccagttgacaggtttgaactggatggcatttttatggtctagaaatgaaaacggcatt
ttggcagatgaaatgggtttaggtaagacagttcaaactgttgcatttttgtcctggtta
atttatgcaagaagacagaatggtcctcatttggttgtagtgccattatcaacggtgccc
gcatggcaagagacttttgaaaaatgggctcctgatgttaattgtgtttattacatgggt
aatggagaggcccggaaaactgtaagggagtatgagctttataaccaaaataacaaacca
aagttcaatgtcttgttgacaacctatgaatatattttgaaagacagaactgaactcggg
gcattcaaatggcagtttttggccgtcgacgaagcacataggttgaagaatgcagaatca
tcattgtatgaagcattgaaaagtttcagagttagcaacagattattaattactgggacc
ccattgcaaaataatgtcaaggaattggcggcattatgtaactttttgatgcccggaaag
tttacaatagaccaggagattgattttgaaactattgattccgaacaggaacagtacatt
aaggatttgcagaaaaaaataagtccgttcattttgagacgtttgaaaaaggatgttgag
aaatctttgccatcaaagtcagagcgtattttgagagtggaattatccgatatacagact
gaatactataaaaatatcattactaagaactacgctgcgttgaatgctggtaatagggga
tcccaaatatcgttattaaatatcatgagtgagttaaaaaaagcatctaaccacccttac
ttgtttgatggcgcagaggaaaaagttttggataaagaaggttctcattctagagagaat
accctcaaaggaatagtaatgtcgtcgggtaaaatggttttacttgaacagttattatcg
aggttgaagaaagaaggtcaccgtgttttgattttttctcaaatggtgagaatgctagat
atattaggtgactatatgtttataaaagggtatcagtttcaaagattggatggtactgtg
ccgtcatcgaaaagaaaaattgctattgaccactttaatgcacttggatccaaggatttt
gcatttttattatccaccagagcaggtggtttgggtattaacttgatgactgctgatacg
gttattatctttgattctgattggaatcctcaggcagatttgcaagccatggctcgtgca
cacagaattggtcaaaagaaccatgtctcagtgtatcgtttcgttagtaaagatactgtt
gaagaacaaatattagaaagagcaaggaaaaagatggttcttgaatatgctatcatttca
ttgggtataactgaccccaatgccaagagcagtagcaaaactgaaccgtcgactaacgaa
ttgagccagattttgaaatttggtgctggtactatgtttaaagaaaataataatcaacaa
aaattggaaaatttgaacttagatgatgtcttgagtcacgcagaagaccatgtaactact
cctgaattaggtgaatccaatttgggctctgaagaattcttgaagcaatttgaggttaca
gattacaaggctgatgttgagtgggatgacattattccacaggaagagttgaccaagttg
aaagacgaagaaaaaaggaaagccgacgagcaatatttacaagatcagattgcgatgtat
tcaagaagaaaagctgctattcgcaagtttgaaaatggctcctctgtgccaagtgatgtt
gaggatagtggcgaagacctgaggccattgagaagaagaaatgctggagaccaccagcta
tctgaaaaagaaattagaggtatttatagatctatcttaaagtggggagaattgagtggc
aaatgggaacagttagtggaagaagggagcatcacaaacaagaatcccgtattagtcaaa
catgcctataatgaaattatcagcacttcgaagcaattggtgaaggaagaagaagcaaga
cgtggtgttgttcttgctgaattagaaagaaaggctgaagaacaaaagaggcgaccacca
gtaccgggtgaaccaaatcaaactgcattatggattgcaaagaagaaagaaaaaaaggcc
gtgttatttgagtaccagggtgtgaaaaacataaatgctgaattagtattgaatagacca
gtggatatgaaattgttggaaaaaattgtaacaaaaacagatttcatgaattttgtgtta
ccaagacacccgaaacaggtacaagcttggtcttgtgagtggacagctaaagacgatgca
atgttgttggtcggtgtttacaaatttggttatggatcttgggtacagatcagagacgac
ccgttgttaggcttacagaacaaactatttttagaaaaccctagtacaggaaaagatccc
gctaccaaacaagatggtaaggaaactgtgaagaaagttcctggctcggtacatctagga
agacgtgttgactatttgtttactttgttaagagacgaagaatctgatagttcagtgggc
ggatctacacctgtcgcaagtgttcgaaagagaattaagaaatcaacaccagttccacac
aacagtagtaacagcaacggcagtcacaacactaacactagtaatagtaatggtggtaca
gcaaacaacacaggcaaacacaggaagcctgtgaagttggaaagttctgaaaaactcatt
aaacaaaagagaacgaatcaacgaagaaactctgcctcagcatctccagcacttggttat
gccaagtttaaagaagaaaagcgagaacttgaatacgaaagcatggacgagggatcatgc
aagtctattatgcagccagtaaccaattcgttgcacaagttgcataagggaagtaaaggg
ttagataaacatgagtgggcaaaaattttaaaatcagaattacttaacattggtgatttt
attgaatcagaggttcggaaagtacaaaacaaggataaactaagaaaacacttgtggtct
tttactggtctttattggccatctaaggtaccaagtaacaaaattggagctatgtataat
aggctcaaacaatctaattag
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