Candida dubliniensis: CD36_04540
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Entry
CD36_04540 CDS
T01140
Name
(RefSeq) RNA binding protein, putative
KO
K12883
nuclear cap-binding protein subunit 2
Organism
cdu
Candida dubliniensis
Pathway
cdu03013
Nucleocytoplasmic transport
cdu03015
mRNA surveillance pathway
cdu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CD36_04540
09122 Translation
03013 Nucleocytoplasmic transport
CD36_04540
03015 mRNA surveillance pathway
CD36_04540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdu03019
]
CD36_04540
03041 Spliceosome [BR:
cdu03041
]
CD36_04540
Messenger RNA biogenesis [BR:
cdu03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
CD36_04540
Spliceosome [BR:
cdu03041
]
Common components
Common spliceosomal components
Cap binding complex
CD36_04540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Keratin_2_head
Motif
Other DBs
NCBI-GeneID:
8044659
NCBI-ProteinID:
XP_002417123
UniProt:
B9W7Q2
LinkDB
All DBs
Position
1:1031212..1031886
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AA seq
224 aa
AA seq
DB search
MNLIEDNFKNSAERLDKPSAYLIRKARHNYGELERAMTSKTVYVGNLSHFTTEEQIHELF
SKCGAIDRIIMGLDRNKLTPCGFCFVIYRSEQGSLNAMKFLQSTILDSQSISIDLDPGFR
EGRQFGRGKHGGQASQEIAAAGGFDNGRSGGGYRGRGRGGFRGGRGGGYRGRGGGFRGGF
RGGRGGGGGGGGFGRGESSVYIPSKDPTFDAPTTFNPLADMSQG
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttattgaagataacttcaaaaactctgcagaaaggctagataaaccatcagct
tatttaatcagaaaggcaagacacaattatggagaattggaacgagcaatgacgctgaaa
acagtgtatgttggtaatttatctcatttcactactgaagaacaaatacatgaattattt
ctgaaatgtggtgctattgatagaatcataatgggattagatagaaataaattaactcct
tgtgggttttgctttgtgatatatcgaagtgaacaaggttctttaaatgctatgaaattt
ttacaatccaccattttggattctcaaagtatatccattgatttggatccagggttccgt
gagggaagacaatttggaagaggtaaacatggagggcaagcatctcaagaaatagctgct
gccggtgggtttgataatgggcgaagtggtggtggctacagaggacgcggcagaggcggg
tttagaggtggaagaggtggtgggtatagaggacgaggtggtggtttcagaggtgggttt
agaggtggaagaggaggaggtggtggtggtggtggttttggccgtggtgagtcttcagta
tatataccttcaaaagatcccacatttgatgcgccaactacatttaacccattggcagat
atgagtcagggttaa
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