Candida dubliniensis: CD36_07820
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Entry
CD36_07820 CDS
T01140
Name
(RefSeq) general negative regulator of transcription, CCR4-NOT complex subunit, putative
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cdu
Candida dubliniensis
Pathway
cdu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CD36_07820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdu03019
]
CD36_07820
Messenger RNA biogenesis [BR:
cdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CD36_07820
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CD36_07820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
8044973
NCBI-ProteinID:
XP_002417428
UniProt:
B9W8K7
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All DBs
Position
1:1860568..1862559
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AA seq
663 aa
AA seq
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MSARKLQQEFDKLNKKISEGLQAFDDIKDKINATESASQREKLENDLKKELKKLQRSRDQ
LKQWLGDSSIKLDKNLLQENRTKIEHAMDQFKELEKSSKIKQFSNEGLELQSQQKRSRFG
DDAKYQEACTYINEVIEQLNGQNEELEQELDSLSGQSKRKGGSSLQSSIEDVKYKIERNN
SHIAKLEEVLENLDNDKLDPAKIDDIKDDLDYYVENNQDEDYVEYDEFYDLLEVDEEDDV
EVQGSLAQMAAETEDERKREEERKREEKEKEKQQQNPPRTSSSMSSSSSSNQNNIGNNTP
PATQVKPLVVTAASGDQNNNSASSVSSTSTPVKKLKPALAPAPAPPPITSATSYSNAIKA
AQTASTSSNSNSSIANTSTDNTNSNTRKSNRSVSPPAATDNHNHAPAAVSTPVKVLPPGL
NHDSSINSTLKSESSSPLVNHAKVNNNHELNISRSQSPMVSNENKAFSDTISRIINVAHS
RLNDPLPLQSITGLLESSLLNCPDSYDAEKPRQYNPVNVHPSSIDYPQEPMYELNSSHYM
KKFDNDTLFFCFYYGDGMDSISKYNAAKELSRRGWVFNTEFSQWFSKDSKNGGKNRSMSV
IQREEENGNIIGDSSSGKEELREKIDDNGEVPSNYKYFDYEKTWLTRRRENYQFANENRQ
IFQ
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaagaaaactacaacaagaatttgacaaactaaacaagaagatttccgaaggg
cttcaagcctttgatgatatcaaagacaagattaatgctacggagtctgcgtcacaacga
gaaaagttggagaatgatttgaagaaggagttgaagaaattgcagagactgagagaccag
ttaaagcaatggctaggagatagcagcattaaattagacaagaatttattacaggagaat
cgtactaagattgaacatgccatggatcagtttaaagaattggagaaactgctgaaaata
aaacagttttctaatgaagggttggagttgcaaagtcaacaaaagcgatcgcgatttggt
gacgatgccaaatatcaagaagcttgtacttatataaatgaggttattgagcaattgaat
ggtcaaaatgaggaattggaacaagaattagattcattgagtggtcaactgaaaagaaaa
ggaggtagttcactacaactgtctattgaggatgttaaatacaagatagaacgaaacaat
tctcatatagccaagttggaagaagttttagagaatttggataacgacaaattggaccct
gccaaaatcgatgatattaaagatgatttagattattatgttgagaataatcaggacgag
gattatgttgaatatgatgaattttacgatctattagaagtggacgaagaagatgatgtt
gaagtccaaggttcattggcgcaaatggcagctgaaactgaagatgaaagaaaaagggag
gaggaaagaaaaagggaagaaaaggagaaggagaagcaacaacagaacccaccaaggacg
tcttcatccatgtccagttccagtagtagtaatcaaaataatattggcaataatactcct
ccagcaacacaagtaaagccgttagtagtgacagctgcaagtggagatcaaaacaataac
agtgcttcctcagtatcgtcaacatcaacaccagtgaagaaattaaagcctgcacttgcg
ccagcaccggcaccgccaccgataacaagtgcaacttcctattcaaatgctataaaggca
gcacagacagcttccacatcctctaattccaattcttctattgctaatacttctactgat
aacaccaattccaacacacgcaaaagcaaccgttcagtgtcacctcctgctgctactgat
aaccataatcatgccccagcagcagtgtccactccagttaaagttttgccgcctgggttg
aatcatgattcatccatcaattctacattgaaatcagagtcgtcatcaccattggtcaac
catgccaaggttaataataaccacgagttgaatattagcagatcgcaactgccaatggtt
tctaatgagaacaaggcatttagtgataccatttctcgaattattaatgttgcccacagc
agattaaatgacccattacctttgcaatcaataaccgggttattagagagctccttgttg
aactgtcccgattcgtatgatgccgaaaagccaagacaatataacccagttaacgtccat
ccgtcactgattgattatccacaagaaccaatgtacgaattgaacagcagtcattacatg
aaaaagtttgataatgatacattgtttttttgcttttattatggcgatggcatggatagt
atttcaaaatataatgctgccaaagaattgtcgagacgaggatgggtgtttaatactgaa
tttagtcaatggttttccaaagatagcaagaatggaggtaagaaccggtcaatgtcggtg
atacaaagagaagaagaaaatggtaatattattggcgatagcagcagtggtaaggaggaa
ttgcgcgagaaaatcgatgataatggtgaagttccaagtaattacaaatactttgattat
gaaaagacatggttaacacgtcgaagagaaaactatcaatttgctaatgaaaacagacag
attttccaatga
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