KEGG   Candida dubliniensis: CD36_09580
Entry
CD36_09580        CDS       T01140                                 
Name
(RefSeq) RNA-binding protein, putative
  KO
K12881  THO complex subunit 4
Organism
cdu  Candida dubliniensis
Pathway
cdu03013  Nucleocytoplasmic transport
cdu03015  mRNA surveillance pathway
cdu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cdu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CD36_09580
  09122 Translation
   03013 Nucleocytoplasmic transport
    CD36_09580
   03015 mRNA surveillance pathway
    CD36_09580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdu03019]
    CD36_09580
   03041 Spliceosome [BR:cdu03041]
    CD36_09580
Messenger RNA biogenesis [BR:cdu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     CD36_09580
    TREX complex
     CD36_09580
Spliceosome [BR:cdu03041]
 Complex C
  Other components
   EJC/TREX
    CD36_09580
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    CD36_09580
SSDB
Motif
Pfam: FoP_duplication RRM_1 RRM_3 xRRM Ivy
Other DBs
NCBI-GeneID: 8045149
NCBI-ProteinID: XP_002417602
UniProt: B9W930
LinkDB
Position
1:2290136..2290918
AA seq 260 aa
MSSNILEQSLDDIIGEKQQHQHQRKFIPSRRRGNPNFRRGGASSRGNRHHPYRSNPSNRR
DTDSYIPRPSSFSSSSSVPKQVLILANGRPTLRIKNIHPELNGEDLSNLFSSISPVDFVK
FDDDNDTIAYICFQNDCERSNSEAIEKFDGKKAMGKLLVVENTTSLLDRIDTRNLNNRIK
IGSSLSNSSYSHPRGISSGRRPPRERKIGGRSARPAKKTAEDLDKELENYMHETTTTTEP
SSEHTTEQVVTSTNDEMTLD
NT seq 783 nt   +upstreamnt  +downstreamnt
atgtcatcgaatattttagaacagtcattagacgatataattggtgaaaaacaacaacac
caacatcaaaggaaatttattcctagtcgtagaagaggaaatccaaatttccgtcgtggt
ggtgcatccagtagaggtaatcgtcatcatccttatcgatcaaatccttcaaatagaaga
gacactgattcatatattcctagacctagctctttttcatcatcatcatcagtaccaaaa
caagtattaatattagctaatggtcgcccaacattacggattaaaaacattcatcctgaa
ttaaatggtgaagatttatcaaatttattttcaagtatatcaccagttgattttgttaaa
tttgatgatgataatgatactattgcatatatttgtttccaaaatgattgtgaaagaagt
aatctggaagcaattgaaaaatttgatgggaaaaaagctatgggtaaattacttgttgtt
gaaaataccaccagtttattagatagaattgatactcgaaatttgaataatagaataaaa
attggatcgtcgttgtctaatagttcttattctcatcctagaggaattagttcaggtaga
cgtcctccaagagaaagaaaaattggtggtaggtctgctagacccgctaaaaagacagca
gaagatttagataaagaattggaaaattatatgcatgaaacaacaacaacaacagaacca
tcactggaacataccactgaacaagttgttacatccacaaatgatgaaatgactcttgat
taa

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