Candida dubliniensis: CD36_09580
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Entry
CD36_09580 CDS
T01140
Name
(RefSeq) RNA-binding protein, putative
KO
K12881
THO complex subunit 4
Organism
cdu
Candida dubliniensis
Pathway
cdu03013
Nucleocytoplasmic transport
cdu03015
mRNA surveillance pathway
cdu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CD36_09580
09122 Translation
03013 Nucleocytoplasmic transport
CD36_09580
03015 mRNA surveillance pathway
CD36_09580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdu03019
]
CD36_09580
03041 Spliceosome [BR:
cdu03041
]
CD36_09580
Messenger RNA biogenesis [BR:
cdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CD36_09580
TREX complex
CD36_09580
Spliceosome [BR:
cdu03041
]
Complex C
Other components
EJC/TREX
CD36_09580
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CD36_09580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FoP_duplication
RRM_1
RRM_3
xRRM
Ivy
Motif
Other DBs
NCBI-GeneID:
8045149
NCBI-ProteinID:
XP_002417602
UniProt:
B9W930
LinkDB
All DBs
Position
1:2290136..2290918
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AA seq
260 aa
AA seq
DB search
MSSNILEQSLDDIIGEKQQHQHQRKFIPSRRRGNPNFRRGGASSRGNRHHPYRSNPSNRR
DTDSYIPRPSSFSSSSSVPKQVLILANGRPTLRIKNIHPELNGEDLSNLFSSISPVDFVK
FDDDNDTIAYICFQNDCERSNSEAIEKFDGKKAMGKLLVVENTTSLLDRIDTRNLNNRIK
IGSSLSNSSYSHPRGISSGRRPPRERKIGGRSARPAKKTAEDLDKELENYMHETTTTTEP
SSEHTTEQVVTSTNDEMTLD
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgaatattttagaacagtcattagacgatataattggtgaaaaacaacaacac
caacatcaaaggaaatttattcctagtcgtagaagaggaaatccaaatttccgtcgtggt
ggtgcatccagtagaggtaatcgtcatcatccttatcgatcaaatccttcaaatagaaga
gacactgattcatatattcctagacctagctctttttcatcatcatcatcagtaccaaaa
caagtattaatattagctaatggtcgcccaacattacggattaaaaacattcatcctgaa
ttaaatggtgaagatttatcaaatttattttcaagtatatcaccagttgattttgttaaa
tttgatgatgataatgatactattgcatatatttgtttccaaaatgattgtgaaagaagt
aatctggaagcaattgaaaaatttgatgggaaaaaagctatgggtaaattacttgttgtt
gaaaataccaccagtttattagatagaattgatactcgaaatttgaataatagaataaaa
attggatcgtcgttgtctaatagttcttattctcatcctagaggaattagttcaggtaga
cgtcctccaagagaaagaaaaattggtggtaggtctgctagacccgctaaaaagacagca
gaagatttagataaagaattggaaaattatatgcatgaaacaacaacaacaacagaacca
tcactggaacataccactgaacaagttgttacatccacaaatgatgaaatgactcttgat
taa
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integrated database retrieval system