KEGG   Candida dubliniensis: CD36_10120
Entry
CD36_10120        CDS       T01140                                 
Name
(RefSeq) CDC48 ATPase, putative
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
cdu  Candida dubliniensis
Pathway
cdu04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cdu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    CD36_10120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdu03019]
    CD36_10120
   03009 Ribosome biogenesis [BR:cdu03009]
    CD36_10120
   04131 Membrane trafficking [BR:cdu04131]
    CD36_10120
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cdu04147]
    CD36_10120
Messenger RNA biogenesis [BR:cdu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     CD36_10120
Ribosome biogenesis [BR:cdu03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    CD36_10120
Membrane trafficking [BR:cdu04131]
 SNARE
  SNARE associated proteins
   Others
    CD36_10120
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    CD36_10120
Exosome [BR:cdu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CD36_10120
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_2 AAA_33 AAA_16 CDC48_2 AAA_5 AAA_22 AAA_14 RNA_helicase TIP49 nSTAND3 Mg_chelatase AAA_28 AAA_17 IstB_IS21 ATPase Parvo_NS1 AAA_7 NPHP3_N AAA_25 AAA_18 ABC_tran ResIII AAA_24 Vps4_C Sigma54_activat PhoH DUF815 AAA_lid_PRS2_C Zeta_toxin eIF-1a Zot UFD1_N2
Other DBs
NCBI-GeneID: 8045203
NCBI-ProteinID: XP_002417655
UniProt: B9W983
LinkDB
Position
1:2427106..2429586
AA seq 826 aa
MTGEEDKKQHFDASGASAVDDKTATAILRRKKKDNALVVDDATNDDNSVITMSSNTMELL
QLFRGDTVLVKGKKRKDTVLIVLADDDMPDGVARINRCVRNNLRVRLGDIVTVHPCPDIK
YANRISVLPIADTVEGINGSLFDLYLKPYFVEAYRPVRKGDLFTVRGGMRQVEFKVVEVD
PEEIAIVAQDTIIHCEGEPINREDEENSLNEVGYDDIGGCKKQMAQIRELVELPLRHPQL
FKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKA
FEEAEKNSPSIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNR
PNSIDPALRRFGRFDREVDIGVPDAEGRLEILRIHTKNMKLADDVDLEAIASETHGFVGA
DIASLCSEAAMQQIREKMDLIDLEEETIDTEVLNSLGVTQDNFRFALGNSNPSALRETVV
ENVNVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAK
AVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGS
HGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPD
EPARLSILQAQLRNTPLEPGLDLNEIAKITHGFSGADLSYIVQRSAKFAIKDSIEAQVKI
NKIKEEKEKVKTEDVDMKEDEVEEEDPVPYITRAHFEEAMKTAKRSVSDAELRRYESYAQ
QLQASRGQFSSFRFNENSGATDNGSAAGANSGAAFGNVEEEDDLYS
NT seq 2481 nt   +upstreamnt  +downstreamnt
atgactggtgaagaagataaaaaacaacattttgatgcttcgggtgcttctgctgtagat
gataaaacagcaacagcaattttaagaagaaaaaagaaagataatgccttggtggttgat
gacgccaccaacgacgacaattctgtcataaccatgtcttcaaacacaatggaattgttg
cagttatttcgtggtgacacagtcttggtgaaaggtaaaaagagaaaagacacagtgttg
atcgttttagctgatgatgatatgcctgatggcgttgctagaattaacagatgtgttcgt
aacaatttgcgtgtcagattgggagatatcgtcactgtccatccatgtcctgatatcaaa
tatgccaatagaatctcagtattgccaattgctgatactgtcgaaggtattaatggttcc
ttatttgacctttacttgaagccatactttgttgaggcttatagaccagtgagaaagggt
gatttatttactgtaaggggtggtatgagacaagtggaattcaaggttgttgaagttgac
cctgaagaaattgcaattgttgctcaagacaccattattcattgtgaaggagaacctatt
aatcgtgaagacgaagaaaacagcttaaatgaagttggttacgacgatattggaggttgt
aaaaaacaaatggcccaaatcagagagttggttgaattgcctttgagacatccacaattg
ttcaaatcaattggtattaaaccaccaaagggtattttgatgtacggtcctcctggtact
ggtaaaaccatcatggcaagagcagtggctaatgaaacaggtgccttcttcttcttgata
aatggtccggaaatcatgtctaaaatggctggtgagtcggaatccaatttaagaaaagct
tttgaagaggcagaaaagaattctccttctattattttcattgatgaaattgattctatt
gccccaaaaagagataagaccaatggtgaagtggaaagaagagtcgtttctcaattgtta
actcttatggatggtatgaaagccagatctaacgtagtggttattgctgctactaacaga
ccaaattccattgatcctgctttgagaagatttggaagattcgacagagaggttgatatt
ggtgttccagatgctgaaggacgtttagaaatattgagaatccacaccaagaatatgaaa
ttggctgatgatgtcgacttggaagccattgcttctgaaacccatggtttcgttggtgcg
gatattgcatcgttatgttctgaggctgctatgcaacaaatccgtgaaaaaatggatctt
atcgacttggaagaagaaactattgatactgaagtgttgaactctttgggtgtcactcaa
gacaacttcaggtttgctcttggaaactctaacccctctgccttgcgtgaaactgttgtt
gaaaatgttaacgtcacatgggatgatattggtggtttggacaacatcaagaatgaatta
aaagaaactgtggagtatcctgtcttgcatcccgatcaataccaaaaattcggattggct
ccaaccaaaggtgttttattctttggtccaccaggtacaggtaagacccttttggccaaa
gctgttgccactgaagtttctgctaatttcatttctgtcaaaggtccagagttgttgagt
atgtggtatggtgaatctgagtctaatatccgtgatatatttgataaagccagagctgcc
gctcctaccgtggtgtttttggatgaattggattccattgccaaggctagaggtggttct
cacggtgatgcaggtggtgcatctgacagagtggtcaatcaattgttgactgaaatggac
ggtatgaatgctaagaagaatgtgtttgtcattggtgccactaacagaccagatcaaatt
gatcctgcattgttgagaccaggtagattggatcaattgatttatgtcccattgccagac
gagccagctagattatctattttacaagctcaattgagaaataccccattggaacctggt
ttggacttgaacgaaattgccaagatcactcacggtttctcaggtgcagatttgtcttat
attgttcaaagatctgccaaatttgctattaaagactctattgaagcccaagtcaagatt
aacaagatcaaagaagagaaagaaaaggtgaaaactgaagatgttgatatgaaggaagat
gaagttgaagaagaagatcctgtgccttacattactagagctcactttgaagaggctatg
aagactgcaaaaagatctgtctcagatgctgaattacgtcgttatgagtcttatgctcaa
caattacaagcctcgagaggtcaattttctagctttagattcaatgaaaattctggtgcc
accgataatggttcagctgctggtgctaactcaggtgcagcttttggaaacgttgaagag
gaagacgatttgtacagttga

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