Candida dubliniensis: CD36_12230
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Entry
CD36_12230 CDS
T01140
Name
(RefSeq) mismatch DNA repair protein, MutS homologue, putative
KO
K08737
DNA mismatch repair protein MSH6
Organism
cdu
Candida dubliniensis
Pathway
cdu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CD36_12230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdu03400
]
CD36_12230
DNA repair and recombination proteins [BR:
cdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CD36_12230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_27
AAA_29
Motif
Other DBs
NCBI-GeneID:
8045414
NCBI-ProteinID:
XP_002417862
UniProt:
B9W9U2
LinkDB
All DBs
Position
1:complement(2912324..2915992)
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AA seq
1222 aa
AA seq
DB search
MGQISTPTRSSPNAGSNSTGSTKKQSSLMDFFKPMASKDKSKPKQQPSPLSSSPLKSKSN
DTKPFLSSDKENDDHSIMDNYKNTTLATSQPDGPGHNQIKPQLASSPAVSKQVEVKKERK
QPLKEKTTAALNSSPVASTRRGKKINYAESDDEEEVFSSRKKRRIVQDDSEEEEEEDFKP
TDSGSDDDDDMSDFVVDDDDKDEDMGPVSDDDDDDEVVAPKNKTKKPLSKDKPKSSKPNS
SSVSGILGRFDAGSSRQSSSVATPKPKRTPISTLTPPKKSFEKENEERYQWLVDIRDAEK
RPADHPDYDPRTLYIPQSAWSKFTAFEKQYWQIKSKMWNTVVFFQKGKFYELYENDAVIA
NTQFDLKIAGGGRANMKLAGIPEMSFEYWAKEFISHGYKVAKVEQKESMLVKQMRGGATK
EEKIIERELKGILTGGTLTNLDMISNDMATYCLSIKEEEKEDGTKTFGVAFVDTATSELN
FIELDDDAECTKLDTLITQINPKEIICEKRNLCQIATKILKFCAHSDHQIWNALNPITEF
WDYDIALEQLVKAKYYDAENLDDYSKYPKVLVDFKDNHQVTFNAFGGLLYYLKLLKLDTS
IMSLGNIHEYHISRNSASHMILDGITLNNLEILNNTSDGTTKGTLFKLVNRATTSFGKRQ
LQKWVLHPLFKVDEINQRYDAVDYLMNDGLELRSILQDTLANIPDLERLLARVHGGTLRF
RDFLKVIESFESIASVSSKLVDFTNVESGMLYKYLKSFPHEMCELIQQWEDAFDREQAKT
DTIVPSPGTDEEFDNSQASMEDLKCQLDKLLKEYKRTYKSQEICYRDSGKEIYLIEVPFK
LKVPSDWKQMGSTSKVKRYYSPEVETLAKELRGQQELHKMVCDTLRLRMYEKFDKHYNVW
MQVIQTIANIDCLLALTKASETIGYPSCRPKLIEADKGCIDFKELRHPCFVSTKEFIPND
VQLGGDQPHFGLLTGANAAGKSTLMRTTALAIILSQIGCYIPAESAELTPVDRIMTRLGA
NDNILQGKSTFFVELSETKKILSNATPRSLVILDELGRGGSSSDGFAIAESVLHHLATHV
QSLGFFATHYGTLGLSFKTHPQIKQQRMGIIVDNDSRNITFLYKLETGTAPKSFGMNVAS
MCGIPDEIVDNAEIAAKAYEQTSKLKKMAEESKGDDISLGLQSDFVWLATGRIDDLSKDI
LKYDEPIQKSALENIYKMIDKL
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaatatcaactcctacaagatcatcgccaaatgctggctcaaactccactggg
tcaacaaagaagcaatcatctttgatggatttcttcaagccaatggcatctaaagataaa
ctgaaaccaaaacaacaaccactgccattatcttcgtctccacttaagtccaaatccaat
gatactaaaccatttttatcaagtgacaaagaaaatgacgatcattcaattatggataat
tataagaatactacattggcaacatcccaaccggacggccctggccataatcaaataaaa
ccacaattggcctcttcgccagcagtgtcgaaacaagtagaagtgaaaaaagaaaggaaa
caaccattaaaggagaaaactacagctgcattaaattcgagtccagttgcttcaactcgt
cgtggcaagaaaattaactatgccgagtctgatgacgaagaagaagttttcagcagtaga
aaaaagagaagaattgttcaagatgacagtgaagaagaagaagaagaagactttaagcca
actgattcaggtagtgatgatgatgatgatatgagtgattttgttgttgacgacgacgac
aaagatgaagacatgggaccggtactggatgatgacgacgacgacgaggtggttgcccca
aaaaacaaaaccaagaaaccattatccaaggataaacccaagtcatcaaagcccaatagt
ctgctggtttcaggtattcttggcagatttgatgctggttcttctcgtcaatctagttct
gtggccacaccaaaacctaaaagaacccccatttcaactcttacacctccaaagaagtct
tttgaaaaagaaaatgaagaaaggtatcagtggttggttgatattagagatgctgagaaa
cgccctgctgatcatcccgactatgatccaagaaccttgtatattccacaatcagcttgg
tccaagtttactgcttttgaaaagcaatactggcaaatcaaatccaaaatgtggaacact
gttgtttttttccaaaaggggaaattctatgagttgtatgagaatgatgctgttattgcc
aatacacagtttgatttgaaaattgctggtggaggtcgagcaaatatgaaattggccggt
attccagaaatgtcgtttgagtattgggccaaggaatttatcagtcatggatataaagtt
gccaaagttgaacaaaaggaatctatgttggtcaaacaaatgaggggtggtgccactaaa
gaagaaaagattattgaaagagaattgaaggggatattgactggaggaacattgacaaat
ttggatatgatcagcaacgatatggctacttattgtttaagtattaaagaagaggagaag
gaagatggtactaaaacttttggtgtggcttttgtagatacagccacttctgaattgaat
tttattgaactagacgatgatgcagaatgtacaaaattagatacattaatcactcaaatc
aaccctaaagaaataatctgtgaaaagagaaacttgtgtcaaattgctaccaagattctt
aaattctgtgcccatagtgatcaccaaatttggaatgcattaaatccaatcacagaattt
tgggattatgatattgctcttgagcagttggttaaggccaaatactatgatgcagaaaac
ttggatgattactcaaaatatccaaaagttttagttgacttcaaggataatcatcaggtc
acctttaacgcctttggtggattgttatattatttgaaattgttgaaattggatacaagt
atcatgagtcttggcaatatccatgaataccacatttctcgcaattcagcttcccacatg
attttagatggtattacgttaaacaatttggaaattctcaacaatacgagcgatggcact
actaagggtacccttttcaaattagtgaatcgtgccactacatcatttggcaagagacaa
ctacaaaaatgggttttgcatccattgtttaaagtagacgagatcaatcaaagatatgat
gcagttgactatttgatgaatgatggattagaattgaggtctattctccaggatactttg
gcaaatattcctgatttggaaagacttttagcaagagttcatggaggaacattgagattt
agagatttcttaaaagtcattgaaagttttgaaagcattgctagtgtcagttccaagttg
gttgatttcaccaatgttgaaagtggtatgctctacaagtacttgaaaagtttccctcat
gaaatgtgtgaattaattcaacaatgggaagatgcatttgatagagaacaggctaaaaca
gatactatagttccctcgcctggtactgatgaagaatttgataattcacaagcatctatg
gaagatttgaaatgtcaattggacaaactattaaaggaatacaagagaacctacaaatca
caagaaatttgttatcgtgattcagggaaagaaatctatcttatcgaagtcccattcaag
cttaaagtaccaagtgattggaagcaaatggggtctacttcaaaagtcaaacgatactat
tctccagaagttgaaacattggctaaagaattaagaggtcaacaggagttacacaaaatg
gtttgtgatactttgaggttaagaatgtatgagaaatttgataagcactacaatgtttgg
atgcaagtcatccagacaattgccaatatcgattgtttattggcattaaccaaagcatca
gaaacaatcggatatccttcgtgtcgtccaaaactaattgaggctgataaaggttgcata
gatttcaaagagttgagacacccatgctttgtgagcactaaagaatttatccctaatgat
gtacaacttggaggtgaccaacctcattttggtcttcttactggtgccaatgctgctggg
aagtcaacattgatgagaacaactgcattggctattatcttgagtcaaattgggtgttac
attccagctgaactggctgaattgacaccagtggatagaataatgactagattgggtgct
aatgataacattttacaaggcaaatcgacatttttcgtcgaattatcggaaacaaagaaa
attttgagcaatgcaacaccaagatctttggttatattagatgaattgggtagaggaggt
tccagtagtgatggttttgcaattgccgaatcagttttgcatcatttagctacacatgtt
caatcattaggatttttcgctacgcattatggtactttggggttatcttttaaaactcat
ccacaaatcaagcaacaacgaatgggaattattgttgacaatgattcgcgtaatatcaca
tttttatacaaattggaaacaggaacagctcctaaatcttttggtatgaatgttgcatca
atgtgtggtattcctgatgaaattgttgataatgcagaaattgccgccaaggcatatgaa
caaacctctaaattgaaaaaaatggcagaagaaagtaaaggtgatgatattagtttggga
ttacaaagtgattttgtttggttagccactggcagaattgatgacttgagtaaagatata
ttaaagtacgatgaaccaattcaaaagagtgctcttgaaaatatctacaaaatgatagat
aagttatag
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