Candida dubliniensis: CD36_16340
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Entry
CD36_16340 CDS
T01140
Name
(RefSeq) chromatin elongation factor, putative
KO
K15172
transcription elongation factor SPT5
Organism
cdu
Candida dubliniensis
Pathway
cdu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CD36_16340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdu03021
]
CD36_16340
03019 Messenger RNA biogenesis [BR:
cdu03019
]
CD36_16340
Transcription machinery [BR:
cdu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CD36_16340
RNA polymerase I system
CD36_16340
Messenger RNA biogenesis [BR:
cdu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
CD36_16340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5_N
Spt5-NGN
KOW4_SPT5
KOW2_Spt5
KOW
KOW5_SPT5
KOWx_SPT5
KOW1_SPT5
KOW7_SPT5
Motif
Other DBs
NCBI-GeneID:
8045683
NCBI-ProteinID:
XP_002418115
UniProt:
B9WAJ5
LinkDB
All DBs
Position
2:269658..272486
Genome browser
AA seq
942 aa
AA seq
DB search
MSDSDQPIQVKKEPSFANDDDLTFDEEFRRAGDQGQENKEVENPDDTTSLKRTREESEQE
ETNDKEKEDEKEEEEEEEEDEDDEDDEEEEEVSSRRKRRRGANQFFDIEAEVDDEEEDED
DEDEEAELMREEFITDDHAPVETVEKMPQDDRLHRQYDNRRQQAEDQDAEQLAETLKQRY
RKTHSVYRGETATSGTVSQKLLMPSINDPSIYAIRCTPGREKELVRKLYEKKRTLERQGN
PLDILTVFQRDAFTGYIYIEAKRPDAIDKALVGMVNVFVRDKLLVPVKEYPDLLKQVKSS
DVEIRPGIYVRIKRGIYRGDLAIVDNLSENGLDVRCQVVPRLDYGQNDEIGPDGKVIKSK
IKPMPALFSEQKARMYDPYKLQMGRVPNSFIYRGNEYYDGYLYKDFKLQFIQTKDVNPTL
EELDRFQNQNDEDGLNLQAIAATLKGNNASEGKSSTAFQPGDKVEIRRGEQAKTIGVVVE
TALNEITIKVTDSGDPRFVDQRLTVPANDLRKIFYEGDHVRIVEGKHFDETGLVIKIDGD
SVVIVSDQTKEDVRVFANYLVKATDASSNFDLLSNKYDIKDLVELSGLTVGVIVKAEKNI
FDVLTTDGRLISVKQSGIASKLKQSRREQVATDRNGMTIRVGDTVKELLGEKSREGAILH
IYKNALFIKSNEIVENLGIFVANRMNVTTIATKDSMVSKSLGPDLTSMNPNLRLPNPVAV
AGLKTRVGGRDKLLYKDVAVTSGSYKGLKGKVTEADDLYARIELHTKSKKIKVLKNNLNV
IVHGQPVPYLRFIGAAPELSQPNPPVYGSNGDRSTWNGGMTPSVAAASGGTSAWGGNRAG
FGGDGGKTPAYGAGAASAWGGASAWGGGAGGNSAWGGNKGAGSAWGGNKGAGSAWGGNKG
GNSAWGGNKGGNSAWGGGSTWGSGGNSTWGGKKGNNSTWGGK
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagtgatcaacctattcaagtaaaaaaggaaccatcatttgctaacgatgat
gatttgacttttgatgaagagttcagaagagctggtgatcaaggacaagagaacaaagag
gttgagaatcccgatgatactacatccttaaaacgtactcgtgaggaactggagcaagag
gaaaccaatgacaaagaaaaagaagacgagaaagaggaagaagaagaagaagaagaagat
gaggatgatgaggatgacgaagaagaagaagaagtttctagtagaagaaaacgaagaaga
ggagctaatcaattcttcgatatagaagcagaagtcgatgatgaagaagaagatgaagac
gatgaagatgaagaagcagagttgatgagagaggaatttatcactgatgaccatgctcca
gtcgaaacagtggaaaagatgccacaggatgatagattacacagacaatacgacaatcgt
cgtcagcaagcagaagatcaagacgctgaacaattggcagaaactttaaagcaaagatat
agaaagacccattcagtatataggggagagactgctaccagtggtactgtatcgcaaaaa
ttattaatgccatcgatcaacgatccatctatttacgctatcaggtgtacacccggtaga
gagaaggaattggttcgtaaattatatgaaaaaaagagaacactcgagagacaaggaaac
cctttagatatattaactgtattccaaagagatgcatttaccggatacatatatatcgaa
gccaaaagacccgatgcaattgataaagctctcgtgggtatggtaaatgtttttgttaga
gacaagttgttggttccagtgaaagagtatcccgatttattgaagcaagttaaatcatct
gatgttgaaatccgtcctggaatttatgtaagaatcaagaggggaatttatagaggtgat
ttagcaattgttgataacttgtcagagaatggtttggatgtgcgttgtcaggttgttcca
agacttgattatggacagaatgatgaaataggacctgatggaaaggttataaaactgaaa
atcaaaccgatgccagcattatttagtgaacaaaaggcgagaatgtatgatccgtataaa
ctccagatgggaagagttcccaacagtttcatctatcgtggtaatgagtactatgatggg
tacttgtacaaagattttaaattgcagttcattcaaaccaaggatgttaatcccactctt
gaagagttggacaggttccaaaaccaaaatgatgaagatgggttaaacttacaagcgata
gccgcaacattaaaaggcaacaatgcaagtgagggtaaatcatcgacagctttccagcct
ggagataaagttgaaattcgtcgtggtgaacaggccaaaactattggtgttgtcgttgaa
actgcgttgaatgaaatcacgataaaggttacagatagtggtgatccaagatttgtggac
caaagattgacagttcctgccaatgatttgaggaaaattttctatgaaggtgaccacgtg
agaattgttgaaggtaagcactttgatgagactgggttagttataaagattgacggagat
tctgtcgttattgtcagtgaccaaacaaaagaggatgtaagagtatttgccaattatctt
gtgaaagcaacagatgcttcttccaattttgatttattgagtaataagtatgatatcaag
gatttggtcgaattgagtggtttaactgtaggggttattgtcaaggctgagaaaaacata
ttcgatgtgcttaccaccgatggccgtttaatcagtgttaaacaatcgggtattgcttcc
aaactcaaacagagccgccgtgaacaagtagctactgatagaaacggtatgactataaga
gtcggtgacactgttaaagagttgttgggtgagaaatctagagaaggtgctattttgcat
atttacaaaaatgcattgtttatcaaatctaatgaaatagtggaaaatttgggtatattt
gttgcgaaccgtatgaatgttacgacaattgctacaaaagattcaatggtgtctaaaagt
ctaggtccagatttgacaagtatgaatccaaacttgagattacctaatcctgtcgctgtt
gctggattaaaaactagagttggtggcagagacaaattgttgtacaaagatgtagctgtt
actagtggtagctataagggattgaaaggtaaggttacagaagcagacgacttgtatgcc
agaatcgaattacacacaaagagcaagaagatcaaagtccttaaaaacaacttgaatgtt
attgttcatggtcagcccgtgccctatttaagatttattggtgcagcaccggaactttca
caacctaacccaccagtgtatggttcaaatggagacagatccacttggaacggtggtatg
acaccttccgtagcagctgccagtggtggtacatcggcttggggaggaaatagagctggt
tttggtggagatggtggtaagactccagcatatggtgctggagctgcctctgcctggggt
ggtgcttctgcttggggtggaggagcaggaggaaattccgcctggggtggcaataaaggt
gcaggctctgcctggggtggtaataaaggtgcaggttctgcctggggtggaaacaaagga
ggaaactctgcctggggtggaaataagggaggcaattccgcatggggtggaggaagtacc
tggggcagcggtggcaattcaacatggggaggcaaaaaaggtaataatagtacatgggga
ggtaagtga
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