Candida dubliniensis: CD36_19430
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Entry
CD36_19430 CDS
T01140
Name
(RefSeq) protein RLR1 homologue, putative
KO
K12879
THO complex subunit 2
Organism
cdu
Candida dubliniensis
Pathway
cdu03013
Nucleocytoplasmic transport
cdu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CD36_19430
09122 Translation
03013 Nucleocytoplasmic transport
CD36_19430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdu03019
]
CD36_19430
03041 Spliceosome [BR:
cdu03041
]
CD36_19430
Messenger RNA biogenesis [BR:
cdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
CD36_19430
Spliceosome [BR:
cdu03041
]
Complex C
Other components
EJC/TREX
CD36_19430
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CD36_19430
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC2_N
Tho2
Thoc2
DUF6852
Motif
Other DBs
NCBI-GeneID:
8045974
NCBI-ProteinID:
XP_002418422
UniProt:
B9WBF2
LinkDB
All DBs
Position
2:complement(1021054..1025859)
Genome browser
AA seq
1601 aa
AA seq
DB search
MSLSYITEEVIENFSGSGMDSLFEVLESYQENDAESEEILAQIFTELLITFEEDKLDVND
IKKFFTHAIKSDDHARIFFQVLNSFAVSKNIHDLLHLLFRDNKIKIETLALHLSSDFLKS
VEIVPKDYFQRTLSHKIRDEYFTQKKFNLLHEEVEGYSKFVSEMYYILDSSDAEFQLDYA
IQIMEKLIGHYDLDPNRCLSLLFQVFTATIVPHYHFILNLLRKSRWWPNIESDNSSLSSL
GIGGSETAAKVIGLELVGETGTRDLPETYKCLVAIFIKEGFVSFGSLYKFMGSDELEMDE
LEAEYKKKLDRDVLVAGATALALAAPLADEEDEEGEKGENKTKGKTRQAATEKDLASLLK
VNMKYQFLKVFLGVGLYWPAIFILTKYPYLAQIDEEITFLINRLFATMINPLYCKLRIFS
DEEIGNLQKPKGTTISRPHNTVLIEHSPVTNLLSFYPLVHGYGNKKFTYFYREFSKDLPK
IEDIDSLIAVSNELLKFNGPNLAKDTDIFIETCEVTRYLLCKEEDKSKVFFYFKNFIFPA
MPLIEENSIAINKAFEILLFFPIEDRFSLYGELYNILAKNNPLIKIAYSKAEKSTKDVLK
RLSKENVRPMMRRLAKICFSNPLPCLLTILQQIESYDNLNTLVVETARYFNAYGWDNLTA
AILIRLASSRSSTYNGMSERQWVQSLASFIGKICQRYPHAIDIKTILAFILKSFYSGDTI
GLLVLKEMFISMGGIQHITNLTINQIDMINCGSSLQKIVYNTIDDLRFERRATGKYLIKC
MNEIDAVNELLVLLCRISNDVTFTGNESYLKVLVSKSDDVNAVIRLFVTLINLYDESLNL
MPIKQLSDFGVPWSWAYEVWRFRDETDKDSLSLESTTSIFDNFWKLSLHDINYTNELYDN
ETVKLESNIKSLKDSIVINLKNKELPRTVIDKQRKELETCEEYQKTLADERAKHKHENEK
IEQQLKSISSNWFIDLGFEEFIQKCIFPRAITSSFDAVYSARFLFKLNSMRIDNYSLVNV
LGLLFKSESLFGTLCSSTPTEAENIGLFFADILRTLQGWRDESKYGEVGLQDQDGDKIAF
DNFKQLLYDYHSLLLEEIRIGLQAPEYISRNNTIIFLKNLLAVYPSVDDHGKQIVDLIER
ISTTEKRNDLKLASNALLVHVKSKSKNWVPIWDFISMSEEEKEKIIKAKEEERQRIIKEE
AEAKRKKELELEREKQMKLAKEEEEKKKLLAAASLNYDSSAAGTRTQTRSTPIGRSYEKY
AVETRSEAHSRQTTPIPTQTQTRTLTSVPTSPNSLSKENKLQERVNKMKQAYKESRISSD
TGNETLNSEPLGGETIDDEKDAKQEDSKDQEKIDSEAMEKIKSVQNNGETQSTTKTEDST
GDNSTKTSDSSVPKDSGPKRTPLPPQNETKKSISQEDFKGPSEPKRTPLPPQKMVARNKD
DSSGRSEARRAPLPPQHTIKKQSLGAESSNGAGSSRPPSGQSNANTFRNDVRSSKGVSSS
SQQNSRQPQSASIPPPPPLPPVQHPRGRNDYGNSRGYQSNRDNYGRHSNSRNDSRPATNR
NPTYDNRARNQGSRDSRNTGRNDKRSADGFGGRGYDKRPRH
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atgtctttactgtacattactgaagaggtgattgaaaacttttctggtagtggaatggat
ctgctatttgaagtgttggagtcataccaagaaaacgacgcagaatcagaagagattctt
gctcaaattttcacagagttattaataacatttgaagaagataaattggatgtcaatgat
atcaaaaagtttttcactcatgcaataaagtcggatgatcatgcaagaatctttttccaa
gttctcaattcgtttgctgtatcgaaaaatatacatgacttgttgcatttacttttccga
gacaataaaatcaaaatagagacattagctttacacctaagttcggattttttaaaatca
gtggaaattgttccaaaagattatttccaaagaactttaagtcacaagattagggatgaa
tatttcacgcaaaaaaagttcaatttgcttcatgaagaagtggaagggtattcaaagttt
gtgtcagaaatgtattatattttagatagcagcgatgctgaatttcaacttgattatgct
attcaaattatggaaaaattgattggtcattatgatcttgatccaaacagatgtttgagt
ttgttatttcaagtattcacggcaaccatagtgcctcattaccatttcatattaaatctt
ttgagaaagagtaggtggtggccaaatattgaaagcgataattcctcattatcaagcctt
ggcattggaggaagtgaaacagcagccaaagtaattggcctagagcttgtgggtgagact
ggcacaagagacttacctgaaacatacaagtgtcttgtggccatttttatcaaagaagga
tttgtaagctttggatcattgtacaaattcatgggctcagatgaattggaaatggatgaa
ttagaggccgagtacaaaaagaagttggatcgtgatgtattagttgctggggccactgct
cttgctcttgcagcaccactagctgacgaagaggatgaagaaggagaaaaaggtgaaaac
aagacgaaaggaaaaaccagacaagcagcaacagagaaagatttggctagcttattaaaa
gtgaacatgaaataccagtttcttaaagtattcttgggagttggactttattggccagcg
atattcattttgacaaagtatccatatttggctcaaattgacgaagaaatcacattttta
attaacagattatttgcaactatgattaatccattatactgcaagctaagaattttcagt
gacgaagagataggtaaccttcaaaagcccaaaggaacaacaattagtcgtccacataat
acagttcttattgaacattcacctgttaccaatttgttaagtttttatccattagtacat
ggatatggcaacaaaaaatttacttatttttatagggagttttcaaaagatcttcccaaa
atagaagatatcgatagtttgatagcagtttcaaatgagcttctcaaatttaacggacca
aatcttgcgaaagacacagatatatttattgaaacttgtgaagttacgcggtacttgttg
tgcaaagaagaagataaaagcaaagttttcttttatttcaaaaactttattttcccagca
atgccattaatagaagagaattccattgcaataaacaaagcttttgaaatattattgttc
tttccaattgaagacagattcagtctttatggggaactatacaacatattagccaagaat
aatccactaatcaaaatagcttatagcaaagctgaaaaatcaactaaagatgttttaaaa
agattatcaaaggagaatgttcgtcccatgatgagaagattagccaaaatttgtttttct
aatccattgccttgtttgttaacaattttgcaacagattgagagttatgataacttgaac
accttggttgttgaaactgctagatactttaatgcgtatgggtgggataatttaactgct
gccatattgataagattagcttctagccgaagcagtacctataacgggatgagtgagcgt
cagtgggttcaatcattggcttcatttattggtaaaatttgccaaagataccctcatgct
attgacataaagactatactagcgtttatattgaaatcattttactcaggagacactatt
ggtttactagtactcaaggagatgtttatttcaatgggaggtattcaacatataacaaat
ttgacaataaaccaaattgatatgattaattgtgggtcatctttacaaaaaattgtttat
aacactatagacgatcttcgatttgaaagaagagccactgggaaatatcttattaaatgt
atgaatgagattgatgcggttaacgaattgctagtgttgctttgtcgtatatcgaatgac
gtgacttttaccgggaacgaatcatatttgaaagttttggttagcaaaagtgatgacgta
aatgcagtaatccgattatttgttacattaatcaacttatatgatgagagtttgaatttg
atgccgataaaacaattgtcggattttggtgtaccatggtcatgggcatacgaagtctgg
agatttagagacgagacagataaggatagtctttcacttgagtccacgacttcaattttt
gataacttttggaagctttcgctacatgatatcaactacacaaatgaactttatgataat
gaaactgttaaactcgaatcaaatatcaaaagcttaaaggattctattgtcattaatttg
aaaaataaagaattaccccgtacagtaattgataaacaacgaaaagagttggaaacctgt
gaagaatatcaaaaaacattggcagatgagagagccaaacataaacatgaaaatgagaaa
atcgagcaacaattaaagctgatttcatccaattggtttattgatttaggttttgaggag
tttattcagaagtgtatatttccaagagcaatcacttcttcgtttgacgccgtttattct
gcaagatttcttttcaaattgaattccatgaggattgacaactattcgttggtaaatgtt
ttaggcttgttattcaaatcagaaagtttatttgggacgttatgttcatcaactcctaca
gaagctgagaacattggattgttttttgctgatattttgagaacattacaagggtggaga
gatgagtctaaatatggagaagttggtttgcaagatcaagatggagataaaattgctttt
gataatttcaaacagctcctttacgattatcattcattgcttttggaagaaatcagaata
ggattacaagcacctgaatatatctcgcgtaacaacaccattatatttttgaagaatttg
ttagctgtgtatccaagtgttgatgaccatggtaaacagattgttgatttgattgaaaga
atatcaacaacagaaaagagaaatgatttgaaattagcctcgaatgcattgttggttcat
gtcaaatcgaaatcgaagaactgggttcctatttgggactttatttcaatgagtgaagaa
gaaaaagagaaaataatcaaagcaaaggaggaagaaagacaaaggattattaaagaagaa
gcagaagccaaaagaaaaaaggaattagaattagagagggaaaaacaaatgaaattagcc
aaagaggaagaagaaaagaaaaagcttttagctgctgcatctttgaattatgattcactg
gctgctggtaccagaactcaaacaagaagcacaccaattggaagatcatatgaaaagtat
gcagttgaaacaagatcagaagctcattcaagacagacaactccaattccaacacaaaca
caaacacggactttaacatctgttccaacgtcacctaattcattgtctaaagagaacaag
ttacaggaacgagtaaacaagatgaaacaagcttataaagaatctcgaatctcttcagac
acaggaaatgaaactttgaattctgagccacttggcggtgaaacaattgatgatgaaaag
gatgccaaacaggaggacagcaaagatcaagaaaaaatagactcagaagcaatggagaaa
attaaatctgtccagaataacggtgaaacacaactgactaccaaaacagaagacagtacg
ggtgacaattcaacaaagacatcggattcatcagtaccaaaggattctggccccaaacga
actcccttgcctccacagaatgaaactaaaaagtcaatctcacaggaagattttaagggc
ccatctgaacccaaacgtacaccattacctcctcaaaaaatggttgccagaaataaagac
gactcttctgggcggtcagaagctagacgtgctcctttgcctcctcaacatacaatcaaa
aaacaatcattaggtgcagaatcatctaatggcgctggttcttcacgtccaccactggga
caatcaaatgccaatacatttagaaacgacgtaagatctagtaaaggtgttagttcaagt
agtcaacaaaactcaagacaaccacagtctgcttcaatcccccctccaccaccattacca
cctgtacaacaccctagaggaagaaatgattatgggaattctcgagggtatcaatcaaac
agagataattatggacgccacagcaattctagaaatgatagtagaccagctaccaaccgg
aatcctacttatgacaatagagccagaaatcaaggtagcagagacagtagaaacactgga
agaaatgacaagagaagtgctgatggttttggtggaagaggatacgataagagacccaga
cattaa
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integrated database retrieval system
