Candida dubliniensis: CD36_20130
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Entry
CD36_20130 CDS
T01140
Name
(RefSeq) mRNA 3'-end-processing protein, putative
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cdu
Candida dubliniensis
Pathway
cdu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CD36_20130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdu03021
]
CD36_20130
03019 Messenger RNA biogenesis [BR:
cdu03019
]
CD36_20130
Transcription machinery [BR:
cdu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CD36_20130
Messenger RNA biogenesis [BR:
cdu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CD36_20130
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCCH_4
zf-CCCH_RBM22
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
8046041
NCBI-ProteinID:
XP_002418492
UniProt:
B9WBM2
LinkDB
All DBs
Position
2:complement(1170237..1170887)
Genome browser
AA seq
216 aa
AA seq
DB search
MLQSNPVIHPNTSNRHFKFEPFLRQEYNFGLDPDRPVCQFYNPLNPDNSCPQGNNCPNKH
VSAMYSNKIVCKHWLRGLCKKGDHCEFLHEYNLRKMPECLFYSKNGYCTQTSECLYLHVD
PQSKIPECLNYNQGFCSEGPNCKNRHVRRVLCPLYLYGFCPKGPECEFTHPKFDFHNLNL
RIRPDNLIQMTSKHVENAKEEESEMKDDSEPKEESV
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgctacagctgaatccagtaatacacccaaacacatcaaatagacatttcaagtttgaa
ccatttttgcgtcaggaatacaattttgggcttgatcccgatcgtccagtgtgtcaattt
tacaatccattaaaccctgacaattcttgtccacagggcaacaattgccctaataaacat
gtgtcagcaatgtattcgaataagattgtatgtaaacattggttaagaggattgtgtaaa
aagggtgaccattgcgaatttctacatgaatataatttaagaaagatgccggaatgtttg
ttttattccaaaaatggctattgtactcaaacatcagagtgtttatatctacatgttgat
ccacaactgaaaatacctgagtgcttgaactataatcaaggattttgcagtgaaggtccc
aattgtaagaatcgtcatgttagacgagtgctatgtcctttgtatttgtatggattttgt
cctaaaggtcctgaatgtgaatttactcatcctaaatttgatttccataatttgaatttg
agaattagacccgataatttaatacaaatgacaagtaagcatgtggaaaatgccaaggaa
gaagagtcggaaatgaaagatgattctgaaccaaaggaagaaagtgtatag
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