Candida dubliniensis: CD36_20620
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Entry
CD36_20620 CDS
T01140
Name
(RefSeq) cleavage and polyadenylation factor specificity complex subunit, putative
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
cdu
Candida dubliniensis
Pathway
cdu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CD36_20620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdu03021
]
CD36_20620
03019 Messenger RNA biogenesis [BR:
cdu03019
]
CD36_20620
Transcription machinery [BR:
cdu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CD36_20620
Messenger RNA biogenesis [BR:
cdu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CD36_20620
U7-dependent histone pre-mRNA processing factors
CD36_20620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
RMMBL
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
8046087
NCBI-ProteinID:
XP_002418541
UniProt:
B9WBS1
LinkDB
All DBs
Position
2:1275495..1277858
Genome browser
AA seq
787 aa
AA seq
DB search
MNEQNEFSDEENFKFFGLGGCNEVGRSCHIIEYKNKVIMLDAGMHPALSGHASFPYFDEY
DISKVDILLISHFHVDHSASLPYVMQQSNFRGKVFMTHATKAIYRWLMQDFVRVTSIGNS
RSGDGSGGGEGSNLYTDDDIMKSFDRIETIDYHSTMEIDGIRFTAYHAGHVLGACMYFVE
IGGLKVLFTGDYSREENRHLHAAEVPPLKPDILICESTFGTGTLEPRLELERKLTTHIHA
TIAKGGRVLLPVFALGNAQELLLILDEYWSQNEDLQNVNVFYASNLAKKCMAVYETYTGI
MNDKIRLSSASSKKSNPFDFKFIKSIKDLSKFQDMGPSVVVATPGMLQAGVSRQLLEKWA
PDGKNLVILTGYSVEGTMAKELLKEPTMIQSATNPDLTIPRRIGIEEISFAAHVDFQQNS
EFIEKVSPSKVILVHGDSVPMGRLKSALLSKYASRKGTDQEVKVYNPKNCEELKIGFKGL
KIAKVLGSLAEEQLQILKKVIQDEVSAENSKITELTQEEAEEEEGDKIKESKGETDITQK
PNESSIKVLKTGQVVSGVLVSKDFNLNLLQLQDLHEFTQLSTSIVKSKMHLKINADISLM
VWHLEQMFGYINVINDDEEEWECVIMDVVDIFIDRSKGPGLFITVEWINDNLMADSLADS
VIAILYSIDSSPASVKLSSQNHTHGDNHIVKKEDSMEIDRPVEAHAKSDVQSRIERIALL
LKAQFGDSLKELPEEKAVIQIGKTVANVDYKRLEVECSSKVLKDRVENVIKRGCQLTAPL
SQNSKFT
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagcagaacgagttttcggatgaagagaatttcaaattttttggtcttggaggt
tgtaatgaagttggaagatcatgtcatattatagaatataaaaacaaagtcataatgttg
gatgctgggatgcatccagctctaagtgggcatgcatcgtttccttattttgatgagtat
gatatatccaaagttgatatcttgttgataagccacttccatgtcgatcactctgcgtcg
ttaccatatgttatgcaacaatctaatttccgagggaaagtatttatgacacacgcaaca
aaagctatctaccggtggctaatgcaagattttgttcgagttacttcaataggaaattca
cgatctggagatggtagtggtggtggtgaaggtagcaatttatataccgatgatgatatc
atgaaatcatttgaccgaattgaaaccatagattatcattccaccatggagattgacgga
ataaggtttacagcatatcatgctgggcatgttttaggcgcatgtatgtattttgtcgaa
ataggaggactaaaagttttgtttactggtgattattccagggaagagaatcgacacttg
catgcagctgaagttccaccattgaagccggatattttaatatgtgaatcaacttttggt
acagggactcttgaacccagactagagctagagagaaaattgactacccatatacatgca
acaatcgcaaaaggtgggagagtgctattacctgtgtttgcacttggtaatgctcaagaa
ttattattgattctagatgagtattggagtcagaatgaagatttgcaaaatgtgaatgtc
ttttatgcctccaatttggcaaaaaaatgtatggctgtgtatgaaacttatacggggatc
atgaatgataaaatccgtctttcatcagcatcaagtaaaaagtcaaatccttttgatttc
aagtttatcaagtccattaaggatttatcgaaattccaggatatgggaccttctgtggtg
gttgccacgccaggtatgttgcaagcaggggtctcgagacaattgttagagaaatgggct
ccagatggtaagaacttggtgatattgaccggttattcagtagaaggtacaatggcaaaa
gaacttctaaaggaaccaactatgatacaatcggccacgaacccagatttgacgatcccc
agacgtataggcatcgaagagatttcgtttgctgcccatgtggatttccagcaaaattct
gagtttatcgaaaaggtttctccttcgaaggttattttagttcatggtgattcagttcca
atgggtagattaaaatccgctttattaagtaaatacgcttctcgtaagggaacagatcaa
gaagtgaaggtatataatccaaaaaattgtgaggaattgaaaattgggtttaagggatta
aagattgctaaagttttgggatcgttggctgaagaacaattgcagattctaaagaaagta
atacaagatgaagtaagtgccgagaactccaaaataactgagctcactcaagaagaagca
gaagaagaagaaggggataagataaaggaaagcaagggcgaaacagatataactcaaaag
ccaaacgaatcatctataaaggtgttgaaaactggccaagtggtgtctggtgtattggta
tccaaggatttcaacttgaatcttttgcagttgcaggatttgcatgaatttactcaattg
tctacatcaatagttaaatcaaagatgcatttgaaaataaatgctgatatatcgttgatg
gtttggcatcttgaacaaatgtttggctacattaatgttattaatgacgacgaagaagag
tgggaatgtgtgataatggatgtggtagacattttcattgacagatcaaaggggccggga
ttgtttattacagtggaatggattaatgacaaccttatggctgattctttagctgatagt
gttattgctattttgtactcgatagattcgtcaccagcatctgttaagttatcgagccag
aatcatactcatggtgataaccatatagtcaaaaaggaagattccatggaaattgataga
ccagttgaagcacatgcgaagagtgatgttcaaagtagaattgaaagaatcgccttacta
ttaaaagctcaatttggcgattccctaaaagaattaccggaagaaaaagctgttattcaa
attgggaaaacggttgctaatgtggactacaagcgtttagaggttgaatgttcatcaaaa
gtgttaaaggatcgtgtggaaaatgtcatcaaaagaggttgtcaattaaccgccccatta
agtcagaattcgaaatttacgtag
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