Candida dubliniensis: CD36_29590
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Entry
CD36_29590 CDS
T01140
Name
(RefSeq) RNA processing complex subunit, putative
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
cdu
Candida dubliniensis
Pathway
cdu03018
RNA degradation
cdu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CD36_29590
09123 Folding, sorting and degradation
03018 RNA degradation
CD36_29590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdu03019
]
CD36_29590
03041 Spliceosome [BR:
cdu03041
]
CD36_29590
Messenger RNA biogenesis [BR:
cdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CD36_29590
mRNA degradation factors
5'-3' decay
Lsm complex
CD36_29590
Spliceosome [BR:
cdu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
CD36_29590
Complex C
U2 snRNP components
CD36_29590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Gemin7
SM-ATX
Motif
Other DBs
NCBI-GeneID:
8050105
NCBI-ProteinID:
XP_002421989
UniProt:
B9WLM8
LinkDB
All DBs
Position
R:join(943384..943648,943721..943746)
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AA seq
96 aa
AA seq
DB search
MLFFSFFKTLVDQEVTVELKNDIEIKGTLKSVDQFLNLKLDNITCTNGQRYPYLGAVKNL
FIRGSNVRYVHMNPNSVDCTLLQDASRREAMVQASK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgttatttttcagttttttcaagacattagtcgatcaagaagtgacggtggagttaaag
aatgatattgaaatcaaaggtactttgaaatcagtggaccaattcttgaacttgaaatta
gataacattacctgcacgaatggacaacgatacccctacttaggtgctgtgaagaactta
tttataagaggatccaatgtacgctacgttcatatgaatccaaatagcgtcgattgtact
ttattacaggatgcatcaagaagagaggctatggttcaagcaagtaaataa
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